Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RlimQ9WTV7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RlimQ9WTV7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RlimQ9WTV7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RlimQ9WTV7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RlimQ9WTV7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RlimQ9WTV7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RlimQ9WTV7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RlimQ9WTV7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RlimQ9WTV7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RlimQ9WTV7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RlimQ9WTV7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RlimQ9WTV7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RlimQ9WTV7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RlimQ9WTV7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RlimQ9WTV7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RlimQ9WTV7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RlimQ9WTV7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RlimQ9WTV7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RlimQ9WTV7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.05■□□□□ 0.96
RlimQ9WTV7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RlimQ9WTV7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RlimQ9WTV7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.05■□□□□ 0.96
RlimQ9WTV7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RlimQ9WTV7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RlimQ9WTV7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RlimQ9WTV7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RlimQ9WTV7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RlimQ9WTV7 Nkain2-201ENSMUST00000092602 558 ntBASIC21.04■□□□□ 0.96
RlimQ9WTV7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RlimQ9WTV7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.03■□□□□ 0.96
RlimQ9WTV7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RlimQ9WTV7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RlimQ9WTV7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RlimQ9WTV7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RlimQ9WTV7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RlimQ9WTV7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.02■□□□□ 0.96
RlimQ9WTV7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RlimQ9WTV7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RlimQ9WTV7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RlimQ9WTV7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RlimQ9WTV7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21■□□□□ 0.95
RlimQ9WTV7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RlimQ9WTV7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RlimQ9WTV7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RlimQ9WTV7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RlimQ9WTV7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RlimQ9WTV7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RlimQ9WTV7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RlimQ9WTV7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.99■□□□□ 0.95
RlimQ9WTV7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RlimQ9WTV7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.97■□□□□ 0.95
RlimQ9WTV7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RlimQ9WTV7 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.97■□□□□ 0.95
RlimQ9WTV7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RlimQ9WTV7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
RlimQ9WTV7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RlimQ9WTV7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RlimQ9WTV7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RlimQ9WTV7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RlimQ9WTV7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.95■□□□□ 0.94
RlimQ9WTV7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RlimQ9WTV7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RlimQ9WTV7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.94■□□□□ 0.94
RlimQ9WTV7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RlimQ9WTV7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RlimQ9WTV7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RlimQ9WTV7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RlimQ9WTV7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.93■□□□□ 0.94
RlimQ9WTV7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RlimQ9WTV7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.93■□□□□ 0.94
RlimQ9WTV7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RlimQ9WTV7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RlimQ9WTV7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.92■□□□□ 0.94
RlimQ9WTV7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RlimQ9WTV7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RlimQ9WTV7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RlimQ9WTV7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RlimQ9WTV7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RlimQ9WTV7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RlimQ9WTV7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RlimQ9WTV7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RlimQ9WTV7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RlimQ9WTV7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RlimQ9WTV7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RlimQ9WTV7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RlimQ9WTV7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RlimQ9WTV7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RlimQ9WTV7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RlimQ9WTV7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RlimQ9WTV7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RlimQ9WTV7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RlimQ9WTV7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.88■□□□□ 0.93
RlimQ9WTV7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RlimQ9WTV7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RlimQ9WTV7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RlimQ9WTV7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.87■□□□□ 0.93
RlimQ9WTV7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RlimQ9WTV7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RlimQ9WTV7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms