Protein–RNA interactions for Protein: Q9D6G3

2900055J20Rik, RIKEN cDNA 2900055J20 gene, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2900055J20RikQ9D6G3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Peli2-204ENSMUST00000226513 1320 ntBASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
2900055J20RikQ9D6G3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
2900055J20RikQ9D6G3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
2900055J20RikQ9D6G3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.05■□□□□ 0.64
2900055J20RikQ9D6G3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
2900055J20RikQ9D6G3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
2900055J20RikQ9D6G3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
2900055J20RikQ9D6G3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
2900055J20RikQ9D6G3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
2900055J20RikQ9D6G3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
2900055J20RikQ9D6G3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
2900055J20RikQ9D6G3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
2900055J20RikQ9D6G3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
2900055J20RikQ9D6G3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
2900055J20RikQ9D6G3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.02■□□□□ 0.63
2900055J20RikQ9D6G3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
2900055J20RikQ9D6G3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19■□□□□ 0.63
2900055J20RikQ9D6G3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19■□□□□ 0.63
2900055J20RikQ9D6G3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19■□□□□ 0.63
2900055J20RikQ9D6G3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19■□□□□ 0.63
2900055J20RikQ9D6G3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
2900055J20RikQ9D6G3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
2900055J20RikQ9D6G3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
2900055J20RikQ9D6G3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
2900055J20RikQ9D6G3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
2900055J20RikQ9D6G3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
2900055J20RikQ9D6G3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
2900055J20RikQ9D6G3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
2900055J20RikQ9D6G3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
2900055J20RikQ9D6G3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
2900055J20RikQ9D6G3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
2900055J20RikQ9D6G3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
2900055J20RikQ9D6G3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
2900055J20RikQ9D6G3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
2900055J20RikQ9D6G3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
2900055J20RikQ9D6G3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
2900055J20RikQ9D6G3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.95■□□□□ 0.62
2900055J20RikQ9D6G3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
2900055J20RikQ9D6G3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
2900055J20RikQ9D6G3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
2900055J20RikQ9D6G3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
2900055J20RikQ9D6G3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
2900055J20RikQ9D6G3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
2900055J20RikQ9D6G3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
2900055J20RikQ9D6G3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
2900055J20RikQ9D6G3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
2900055J20RikQ9D6G3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
2900055J20RikQ9D6G3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
2900055J20RikQ9D6G3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
2900055J20RikQ9D6G3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.91■□□□□ 0.62
2900055J20RikQ9D6G3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
2900055J20RikQ9D6G3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
2900055J20RikQ9D6G3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
2900055J20RikQ9D6G3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
2900055J20RikQ9D6G3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
2900055J20RikQ9D6G3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.9■□□□□ 0.62
2900055J20RikQ9D6G3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
2900055J20RikQ9D6G3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
2900055J20RikQ9D6G3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
2900055J20RikQ9D6G3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
2900055J20RikQ9D6G3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
2900055J20RikQ9D6G3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
2900055J20RikQ9D6G3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
2900055J20RikQ9D6G3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
2900055J20RikQ9D6G3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.89■□□□□ 0.61
2900055J20RikQ9D6G3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
2900055J20RikQ9D6G3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
2900055J20RikQ9D6G3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
2900055J20RikQ9D6G3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms