Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmgcs1Q8JZK9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Hmgcs1Q8JZK9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcs1Q8JZK9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Hmgcs1Q8JZK9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Hmgcs1Q8JZK9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hmgcs1Q8JZK9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Hmgcs1Q8JZK9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Hmgcs1Q8JZK9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmgcs1Q8JZK9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmgcs1Q8JZK9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
Hmgcs1Q8JZK9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs1Q8JZK9 Particl-201ENSMUST00000205370 1560 ntBASIC22.12■■□□□ 1.13
Hmgcs1Q8JZK9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs1Q8JZK9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs1Q8JZK9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs1Q8JZK9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hmgcs1Q8JZK9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Hmgcs1Q8JZK9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hmgcs1Q8JZK9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hmgcs1Q8JZK9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hmgcs1Q8JZK9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmgcs1Q8JZK9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Hmgcs1Q8JZK9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs1Q8JZK9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hmgcs1Q8JZK9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Hmgcs1Q8JZK9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.08■■□□□ 1.13
Hmgcs1Q8JZK9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.08■■□□□ 1.13
Hmgcs1Q8JZK9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Hmgcs1Q8JZK9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Hmgcs1Q8JZK9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Hmgcs1Q8JZK9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.07■■□□□ 1.12
Hmgcs1Q8JZK9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Hmgcs1Q8JZK9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Hmgcs1Q8JZK9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs1Q8JZK9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.06■■□□□ 1.12
Hmgcs1Q8JZK9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Hmgcs1Q8JZK9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.06■■□□□ 1.12
Hmgcs1Q8JZK9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hmgcs1Q8JZK9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Hmgcs1Q8JZK9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.05■■□□□ 1.12
Hmgcs1Q8JZK9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs1Q8JZK9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs1Q8JZK9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs1Q8JZK9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmgcs1Q8JZK9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Hmgcs1Q8JZK9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs1Q8JZK9 Nkain2-201ENSMUST00000092602 558 ntBASIC22.03■■□□□ 1.12
Hmgcs1Q8JZK9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs1Q8JZK9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs1Q8JZK9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmgcs1Q8JZK9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hmgcs1Q8JZK9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.01■■□□□ 1.11
Hmgcs1Q8JZK9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Hmgcs1Q8JZK9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs1Q8JZK9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs1Q8JZK9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs1Q8JZK9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmgcs1Q8JZK9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs1Q8JZK9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs1Q8JZK9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs1Q8JZK9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs1Q8JZK9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmgcs1Q8JZK9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcs1Q8JZK9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcs1Q8JZK9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmgcs1Q8JZK9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Hmgcs1Q8JZK9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs1Q8JZK9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.98■■□□□ 1.11
Hmgcs1Q8JZK9 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.98■■□□□ 1.11
Hmgcs1Q8JZK9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Hmgcs1Q8JZK9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmgcs1Q8JZK9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Hmgcs1Q8JZK9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.97■■□□□ 1.11
Hmgcs1Q8JZK9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs1Q8JZK9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs1Q8JZK9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.96■■□□□ 1.11
Hmgcs1Q8JZK9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.96■■□□□ 1.11
Hmgcs1Q8JZK9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Hmgcs1Q8JZK9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs1Q8JZK9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmgcs1Q8JZK9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Hmgcs1Q8JZK9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmgcs1Q8JZK9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmgcs1Q8JZK9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs1Q8JZK9 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.92■■□□□ 1.1
Hmgcs1Q8JZK9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Hmgcs1Q8JZK9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs1Q8JZK9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hmgcs1Q8JZK9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs1Q8JZK9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hmgcs1Q8JZK9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmgcs1Q8JZK9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms