Protein–RNA interactions for Protein: Q8CAE3

Kcnmb1, Calcium-activated potassium channel subunit beta-1, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb1Q8CAE3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Kcnmb1Q8CAE3 Particl-201ENSMUST00000205370 1560 ntBASIC21.43■■□□□ 1.02
Kcnmb1Q8CAE3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Kcnmb1Q8CAE3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Kcnmb1Q8CAE3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Kcnmb1Q8CAE3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Kcnmb1Q8CAE3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
Kcnmb1Q8CAE3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Kcnmb1Q8CAE3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Kcnmb1Q8CAE3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kcnmb1Q8CAE3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Kcnmb1Q8CAE3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kcnmb1Q8CAE3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kcnmb1Q8CAE3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Kcnmb1Q8CAE3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Kcnmb1Q8CAE3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Kcnmb1Q8CAE3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Kcnmb1Q8CAE3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Kcnmb1Q8CAE3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Kcnmb1Q8CAE3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Kcnmb1Q8CAE3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Kcnmb1Q8CAE3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Kcnmb1Q8CAE3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kcnmb1Q8CAE3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Kcnmb1Q8CAE3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Kcnmb1Q8CAE3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.34■■□□□ 1.01
Kcnmb1Q8CAE3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Kcnmb1Q8CAE3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Kcnmb1Q8CAE3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Kcnmb1Q8CAE3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Kcnmb1Q8CAE3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Kcnmb1Q8CAE3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.32■■□□□ 1
Kcnmb1Q8CAE3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcnmb1Q8CAE3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Kcnmb1Q8CAE3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.32■■□□□ 1
Kcnmb1Q8CAE3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcnmb1Q8CAE3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.32■■□□□ 1
Kcnmb1Q8CAE3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcnmb1Q8CAE3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.31■■□□□ 1
Kcnmb1Q8CAE3 Nkain2-201ENSMUST00000092602 558 ntBASIC21.31■■□□□ 1
Kcnmb1Q8CAE3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcnmb1Q8CAE3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.3■■□□□ 1
Kcnmb1Q8CAE3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcnmb1Q8CAE3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.3■■□□□ 1
Kcnmb1Q8CAE3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.3■■□□□ 1
Kcnmb1Q8CAE3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Kcnmb1Q8CAE3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.29■■□□□ 1
Kcnmb1Q8CAE3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kcnmb1Q8CAE3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcnmb1Q8CAE3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.28■■□□□ 1
Kcnmb1Q8CAE3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcnmb1Q8CAE3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Kcnmb1Q8CAE3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kcnmb1Q8CAE3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kcnmb1Q8CAE3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kcnmb1Q8CAE3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kcnmb1Q8CAE3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Kcnmb1Q8CAE3 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.26■□□□□ 0.99
Kcnmb1Q8CAE3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Kcnmb1Q8CAE3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnmb1Q8CAE3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnmb1Q8CAE3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Kcnmb1Q8CAE3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.25■□□□□ 0.99
Kcnmb1Q8CAE3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnmb1Q8CAE3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnmb1Q8CAE3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnmb1Q8CAE3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnmb1Q8CAE3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnmb1Q8CAE3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnmb1Q8CAE3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.24■□□□□ 0.99
Kcnmb1Q8CAE3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnmb1Q8CAE3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.23■□□□□ 0.99
Kcnmb1Q8CAE3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnmb1Q8CAE3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnmb1Q8CAE3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnmb1Q8CAE3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnmb1Q8CAE3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kcnmb1Q8CAE3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kcnmb1Q8CAE3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnmb1Q8CAE3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnmb1Q8CAE3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnmb1Q8CAE3 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.21■□□□□ 0.99
Kcnmb1Q8CAE3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnmb1Q8CAE3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnmb1Q8CAE3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Kcnmb1Q8CAE3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kcnmb1Q8CAE3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.2■□□□□ 0.98
Kcnmb1Q8CAE3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.19■□□□□ 0.98
Kcnmb1Q8CAE3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Kcnmb1Q8CAE3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Kcnmb1Q8CAE3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Kcnmb1Q8CAE3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.17■□□□□ 0.98
Kcnmb1Q8CAE3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms