Protein–RNA interactions for Protein: Q8C4Y3

Nelfb, Negative elongation factor B, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfbQ8C4Y3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
NelfbQ8C4Y3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NelfbQ8C4Y3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NelfbQ8C4Y3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
NelfbQ8C4Y3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NelfbQ8C4Y3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NelfbQ8C4Y3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NelfbQ8C4Y3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NelfbQ8C4Y3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NelfbQ8C4Y3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NelfbQ8C4Y3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
NelfbQ8C4Y3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
NelfbQ8C4Y3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
NelfbQ8C4Y3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.7■■□□□ 1.7
NelfbQ8C4Y3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
NelfbQ8C4Y3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
NelfbQ8C4Y3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.67■■□□□ 1.7
NelfbQ8C4Y3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
NelfbQ8C4Y3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
NelfbQ8C4Y3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NelfbQ8C4Y3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
NelfbQ8C4Y3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NelfbQ8C4Y3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.66■■□□□ 1.7
NelfbQ8C4Y3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NelfbQ8C4Y3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NelfbQ8C4Y3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
NelfbQ8C4Y3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NelfbQ8C4Y3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NelfbQ8C4Y3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
NelfbQ8C4Y3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.64■■□□□ 1.7
NelfbQ8C4Y3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NelfbQ8C4Y3 Nkain2-201ENSMUST00000092602 558 ntBASIC25.64■■□□□ 1.7
NelfbQ8C4Y3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NelfbQ8C4Y3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
NelfbQ8C4Y3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
NelfbQ8C4Y3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NelfbQ8C4Y3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NelfbQ8C4Y3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
NelfbQ8C4Y3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
NelfbQ8C4Y3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NelfbQ8C4Y3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.61■■□□□ 1.69
NelfbQ8C4Y3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
NelfbQ8C4Y3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NelfbQ8C4Y3 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.59■■□□□ 1.69
NelfbQ8C4Y3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NelfbQ8C4Y3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NelfbQ8C4Y3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NelfbQ8C4Y3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NelfbQ8C4Y3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
NelfbQ8C4Y3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.57■■□□□ 1.68
NelfbQ8C4Y3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
NelfbQ8C4Y3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NelfbQ8C4Y3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
NelfbQ8C4Y3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
NelfbQ8C4Y3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NelfbQ8C4Y3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
NelfbQ8C4Y3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
NelfbQ8C4Y3 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.55■■□□□ 1.68
NelfbQ8C4Y3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NelfbQ8C4Y3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.54■■□□□ 1.68
NelfbQ8C4Y3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.54■■□□□ 1.68
NelfbQ8C4Y3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.54■■□□□ 1.68
NelfbQ8C4Y3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NelfbQ8C4Y3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NelfbQ8C4Y3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NelfbQ8C4Y3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NelfbQ8C4Y3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NelfbQ8C4Y3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NelfbQ8C4Y3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NelfbQ8C4Y3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NelfbQ8C4Y3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NelfbQ8C4Y3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NelfbQ8C4Y3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
NelfbQ8C4Y3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NelfbQ8C4Y3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NelfbQ8C4Y3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NelfbQ8C4Y3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NelfbQ8C4Y3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NelfbQ8C4Y3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
NelfbQ8C4Y3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
NelfbQ8C4Y3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
NelfbQ8C4Y3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NelfbQ8C4Y3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
NelfbQ8C4Y3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NelfbQ8C4Y3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NelfbQ8C4Y3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NelfbQ8C4Y3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.48■■□□□ 1.67
NelfbQ8C4Y3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NelfbQ8C4Y3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
NelfbQ8C4Y3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NelfbQ8C4Y3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
NelfbQ8C4Y3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.44■■□□□ 1.66
NelfbQ8C4Y3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
NelfbQ8C4Y3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NelfbQ8C4Y3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NelfbQ8C4Y3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
NelfbQ8C4Y3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.42■■□□□ 1.66
NelfbQ8C4Y3 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.41■■□□□ 1.66
NelfbQ8C4Y3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
NelfbQ8C4Y3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms