Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.99■□□□□ 0.79
Cdkl3Q8BLF2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cdkl3Q8BLF2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkl3Q8BLF2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cdkl3Q8BLF2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkl3Q8BLF2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkl3Q8BLF2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdkl3Q8BLF2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cdkl3Q8BLF2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkl3Q8BLF2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkl3Q8BLF2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkl3Q8BLF2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkl3Q8BLF2 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.96■□□□□ 0.79
Cdkl3Q8BLF2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkl3Q8BLF2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cdkl3Q8BLF2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkl3Q8BLF2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdkl3Q8BLF2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Cdkl3Q8BLF2 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.95■□□□□ 0.78
Cdkl3Q8BLF2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdkl3Q8BLF2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdkl3Q8BLF2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cdkl3Q8BLF2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cdkl3Q8BLF2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdkl3Q8BLF2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdkl3Q8BLF2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cdkl3Q8BLF2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdkl3Q8BLF2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdkl3Q8BLF2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdkl3Q8BLF2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdkl3Q8BLF2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdkl3Q8BLF2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdkl3Q8BLF2 Gm8109-201ENSMUST00000194076 746 ntBASIC19.91■□□□□ 0.78
Cdkl3Q8BLF2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdkl3Q8BLF2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cdkl3Q8BLF2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdkl3Q8BLF2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdkl3Q8BLF2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Cdkl3Q8BLF2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdkl3Q8BLF2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cdkl3Q8BLF2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cdkl3Q8BLF2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cdkl3Q8BLF2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdkl3Q8BLF2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdkl3Q8BLF2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdkl3Q8BLF2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdkl3Q8BLF2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdkl3Q8BLF2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdkl3Q8BLF2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdkl3Q8BLF2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cdkl3Q8BLF2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdkl3Q8BLF2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdkl3Q8BLF2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdkl3Q8BLF2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Cdkl3Q8BLF2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdkl3Q8BLF2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkl3Q8BLF2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.82■□□□□ 0.76
Cdkl3Q8BLF2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkl3Q8BLF2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Cdkl3Q8BLF2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkl3Q8BLF2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkl3Q8BLF2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkl3Q8BLF2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkl3Q8BLF2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkl3Q8BLF2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkl3Q8BLF2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cdkl3Q8BLF2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkl3Q8BLF2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkl3Q8BLF2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkl3Q8BLF2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cdkl3Q8BLF2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cdkl3Q8BLF2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Cdkl3Q8BLF2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkl3Q8BLF2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkl3Q8BLF2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkl3Q8BLF2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkl3Q8BLF2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms