Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Sox21Q811W0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox21Q811W0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox21Q811W0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox21Q811W0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox21Q811W0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox21Q811W0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sox21Q811W0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sox21Q811W0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.9■□□□□ 0.62
Sox21Q811W0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox21Q811W0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox21Q811W0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sox21Q811W0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sox21Q811W0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox21Q811W0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox21Q811W0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.89■□□□□ 0.61
Sox21Q811W0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox21Q811W0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Sox21Q811W0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
Sox21Q811W0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox21Q811W0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox21Q811W0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox21Q811W0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox21Q811W0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox21Q811W0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox21Q811W0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.87■□□□□ 0.61
Sox21Q811W0 Scarna2-201ENSMUST00000157560 414 ntBASIC18.87■□□□□ 0.61
Sox21Q811W0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox21Q811W0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox21Q811W0 Gm4799-201ENSMUST00000095396 657 ntBASIC18.86■□□□□ 0.61
Sox21Q811W0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox21Q811W0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox21Q811W0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox21Q811W0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sox21Q811W0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox21Q811W0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox21Q811W0 Gm37136-201ENSMUST00000194368 194 ntBASIC18.83■□□□□ 0.6
Sox21Q811W0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox21Q811W0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox21Q811W0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox21Q811W0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox21Q811W0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox21Q811W0 Gm16437-201ENSMUST00000025669 507 ntBASIC18.82■□□□□ 0.6
Sox21Q811W0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox21Q811W0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox21Q811W0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox21Q811W0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox21Q811W0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox21Q811W0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox21Q811W0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox21Q811W0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox21Q811W0 Gm45364-201ENSMUST00000210883 159 ntBASIC18.8■□□□□ 0.6
Sox21Q811W0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox21Q811W0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox21Q811W0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox21Q811W0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox21Q811W0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox21Q811W0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox21Q811W0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox21Q811W0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.77■□□□□ 0.6
Sox21Q811W0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox21Q811W0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox21Q811W0 Mir3960-201ENSMUST00000198213 73 ntBASIC18.77■□□□□ 0.6
Sox21Q811W0 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.77■□□□□ 0.6
Sox21Q811W0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox21Q811W0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Sox21Q811W0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox21Q811W0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox21Q811W0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sox21Q811W0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox21Q811W0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox21Q811W0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox21Q811W0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
Sox21Q811W0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.75■□□□□ 0.59
Sox21Q811W0 Gm9806-201ENSMUST00000051080 552 ntBASIC18.75■□□□□ 0.59
Sox21Q811W0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.75■□□□□ 0.59
Sox21Q811W0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox21Q811W0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox21Q811W0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.74■□□□□ 0.59
Sox21Q811W0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox21Q811W0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox21Q811W0 Gm11687-201ENSMUST00000118911 886 ntBASIC18.73■□□□□ 0.59
Sox21Q811W0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox21Q811W0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sox21Q811W0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox21Q811W0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox21Q811W0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sox21Q811W0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox21Q811W0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.72■□□□□ 0.59
Sox21Q811W0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox21Q811W0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox21Q811W0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sox21Q811W0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox21Q811W0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox21Q811W0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.71■□□□□ 0.59
Sox21Q811W0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox21Q811W0 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.7■□□□□ 0.58
Sox21Q811W0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox21Q811W0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox21Q811W0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms