Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.13■■□□□ 1.77
Usp6nlQ80XC3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Usp6nlQ80XC3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.12■■□□□ 1.77
Usp6nlQ80XC3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.12■■□□□ 1.77
Usp6nlQ80XC3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Usp6nlQ80XC3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Usp6nlQ80XC3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Usp6nlQ80XC3 Gm7332-201ENSMUST00000118351 454 ntBASIC26.1■■□□□ 1.77
Usp6nlQ80XC3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Usp6nlQ80XC3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Usp6nlQ80XC3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Usp6nlQ80XC3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Usp6nlQ80XC3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Usp6nlQ80XC3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Usp6nlQ80XC3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Usp6nlQ80XC3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Usp6nlQ80XC3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Usp6nlQ80XC3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.08■■□□□ 1.77
Usp6nlQ80XC3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Usp6nlQ80XC3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
Usp6nlQ80XC3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.07■■□□□ 1.76
Usp6nlQ80XC3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Usp6nlQ80XC3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Usp6nlQ80XC3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.06■■□□□ 1.76
Usp6nlQ80XC3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Usp6nlQ80XC3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Usp6nlQ80XC3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
Usp6nlQ80XC3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 Gm9812-201ENSMUST00000061934 968 ntBASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Usp6nlQ80XC3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Usp6nlQ80XC3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Usp6nlQ80XC3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Usp6nlQ80XC3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Usp6nlQ80XC3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Usp6nlQ80XC3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.02■■□□□ 1.76
Usp6nlQ80XC3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Usp6nlQ80XC3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Usp6nlQ80XC3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26■■□□□ 1.75
Usp6nlQ80XC3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26■■□□□ 1.75
Usp6nlQ80XC3 Gm14523-201ENSMUST00000117260 558 ntBASIC26■■□□□ 1.75
Usp6nlQ80XC3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26■■□□□ 1.75
Usp6nlQ80XC3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Usp6nlQ80XC3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Usp6nlQ80XC3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Usp6nlQ80XC3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Usp6nlQ80XC3 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.99■■□□□ 1.75
Usp6nlQ80XC3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Usp6nlQ80XC3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.98■■□□□ 1.75
Usp6nlQ80XC3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Usp6nlQ80XC3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.98■■□□□ 1.75
Usp6nlQ80XC3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Usp6nlQ80XC3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Usp6nlQ80XC3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Usp6nlQ80XC3 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.94■■□□□ 1.74
Usp6nlQ80XC3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.94■■□□□ 1.74
Usp6nlQ80XC3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Usp6nlQ80XC3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Usp6nlQ80XC3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.94■■□□□ 1.74
Usp6nlQ80XC3 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.93■■□□□ 1.74
Usp6nlQ80XC3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Usp6nlQ80XC3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.92■■□□□ 1.74
Usp6nlQ80XC3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.92■■□□□ 1.74
Usp6nlQ80XC3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Usp6nlQ80XC3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Usp6nlQ80XC3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Usp6nlQ80XC3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Usp6nlQ80XC3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Usp6nlQ80XC3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
Usp6nlQ80XC3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Usp6nlQ80XC3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.89■■□□□ 1.74
Usp6nlQ80XC3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Usp6nlQ80XC3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Usp6nlQ80XC3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.88■■□□□ 1.73
Usp6nlQ80XC3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.88■■□□□ 1.73
Usp6nlQ80XC3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Usp6nlQ80XC3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Usp6nlQ80XC3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
Usp6nlQ80XC3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Usp6nlQ80XC3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Usp6nlQ80XC3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.86■■□□□ 1.73
Usp6nlQ80XC3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Usp6nlQ80XC3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Usp6nlQ80XC3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.84■■□□□ 1.73
Usp6nlQ80XC3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Usp6nlQ80XC3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Usp6nlQ80XC3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Usp6nlQ80XC3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Usp6nlQ80XC3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Usp6nlQ80XC3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Usp6nlQ80XC3 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.82■■□□□ 1.72
Usp6nlQ80XC3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Usp6nlQ80XC3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Usp6nlQ80XC3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Usp6nlQ80XC3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms