Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm2415-204ENSMUST00000190235 2004 ntBASIC33.28■■■□□ 2.92
Gli3Q61602 Gm13889-201ENSMUST00000099689 1386 ntBASIC33.27■■■□□ 2.92
Gli3Q61602 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC33.26■■■□□ 2.91
Gli3Q61602 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Gli3Q61602 Pcf11-205ENSMUST00000208255 1720 ntBASIC33.25■■■□□ 2.91
Gli3Q61602 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Gli3Q61602 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
Gli3Q61602 Gm15820-201ENSMUST00000201566 728 ntBASIC33.24■■■□□ 2.91
Gli3Q61602 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Gli3Q61602 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Gli3Q61602 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC33.23■■■□□ 2.91
Gli3Q61602 Gm14117-201ENSMUST00000122417 843 ntBASIC33.22■■■□□ 2.91
Gli3Q61602 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Gli3Q61602 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC33.21■■■□□ 2.91
Gli3Q61602 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Gli3Q61602 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC33.21■■■□□ 2.91
Gli3Q61602 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
Gli3Q61602 Gm37136-201ENSMUST00000194368 194 ntBASIC33.21■■■□□ 2.91
Gli3Q61602 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC33.2■■■□□ 2.91
Gli3Q61602 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Gli3Q61602 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Gli3Q61602 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC33.17■■■□□ 2.9
Gli3Q61602 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Gli3Q61602 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Gli3Q61602 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
Gli3Q61602 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
Gli3Q61602 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC33.14■■■□□ 2.9
Gli3Q61602 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Gli3Q61602 AC122317.2-201ENSMUST00000218708 1248 ntBASIC33.14■■■□□ 2.9
Gli3Q61602 Gm45102-201ENSMUST00000207427 857 ntBASIC33.13■■■□□ 2.89
Gli3Q61602 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Gli3Q61602 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Gli3Q61602 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Gli3Q61602 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC33.12■■■□□ 2.89
Gli3Q61602 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Gli3Q61602 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC33.1■■■□□ 2.89
Gli3Q61602 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Gli3Q61602 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Gli3Q61602 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Gli3Q61602 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC33.09■■■□□ 2.89
Gli3Q61602 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Gli3Q61602 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Gli3Q61602 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC33.06■■■□□ 2.88
Gli3Q61602 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
Gli3Q61602 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
Gli3Q61602 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Gli3Q61602 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
Gli3Q61602 Gm43566-201ENSMUST00000196851 808 ntBASIC33.04■■■□□ 2.88
Gli3Q61602 Serp2-204ENSMUST00000228055 705 ntBASIC33.04■■■□□ 2.88
Gli3Q61602 Gm13238-201ENSMUST00000117655 780 ntBASIC33.04■■■□□ 2.88
Gli3Q61602 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Gli3Q61602 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Gli3Q61602 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Gli3Q61602 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC33.03■■■□□ 2.88
Gli3Q61602 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Gli3Q61602 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
Gli3Q61602 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Gli3Q61602 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Gli3Q61602 AC153911.1-201ENSMUST00000220378 758 ntBASIC33.02■■■□□ 2.88
Gli3Q61602 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC33.01■■■□□ 2.88
Gli3Q61602 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
Gli3Q61602 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC33■■■□□ 2.87
Gli3Q61602 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
Gli3Q61602 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC33■■■□□ 2.87
Gli3Q61602 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC33■■■□□ 2.87
Gli3Q61602 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC32.99■■■□□ 2.87
Gli3Q61602 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC32.99■■■□□ 2.87
Gli3Q61602 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC32.99■■■□□ 2.87
Gli3Q61602 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
Gli3Q61602 Gm5297-201ENSMUST00000198555 1171 ntBASIC32.98■■■□□ 2.87
Gli3Q61602 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Gli3Q61602 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
Gli3Q61602 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Gli3Q61602 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC32.96■■■□□ 2.87
Gli3Q61602 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Gli3Q61602 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Gli3Q61602 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Gli3Q61602 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Gli3Q61602 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.95■■■□□ 2.87
Gli3Q61602 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC32.95■■■□□ 2.86
Gli3Q61602 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
Gli3Q61602 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Gli3Q61602 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Gli3Q61602 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC32.94■■■□□ 2.86
Gli3Q61602 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Gli3Q61602 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Gli3Q61602 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC32.92■■■□□ 2.86
Gli3Q61602 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Gli3Q61602 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
Gli3Q61602 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC32.91■■■□□ 2.86
Gli3Q61602 Gm9812-201ENSMUST00000061934 968 ntBASIC32.91■■■□□ 2.86
Gli3Q61602 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
Gli3Q61602 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Gli3Q61602 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Gli3Q61602 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Gli3Q61602 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC32.89■■■□□ 2.86
Gli3Q61602 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC32.89■■■□□ 2.86
Gli3Q61602 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
Gli3Q61602 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Gli3Q61602 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC32.88■■■□□ 2.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms