Protein–RNA interactions for Protein: Q5M8N4

Sdr39u1, Epimerase family protein SDR39U1, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdr39u1Q5M8N4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdr39u1Q5M8N4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdr39u1Q5M8N4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdr39u1Q5M8N4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdr39u1Q5M8N4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.88■□□□□ 0.61
Sdr39u1Q5M8N4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdr39u1Q5M8N4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdr39u1Q5M8N4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sdr39u1Q5M8N4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sdr39u1Q5M8N4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sdr39u1Q5M8N4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sdr39u1Q5M8N4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sdr39u1Q5M8N4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdr39u1Q5M8N4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdr39u1Q5M8N4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sdr39u1Q5M8N4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdr39u1Q5M8N4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sdr39u1Q5M8N4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.83■□□□□ 0.61
Sdr39u1Q5M8N4 Zfp131-205ENSMUST00000223812 663 ntBASIC18.83■□□□□ 0.6
Sdr39u1Q5M8N4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdr39u1Q5M8N4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdr39u1Q5M8N4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sdr39u1Q5M8N4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sdr39u1Q5M8N4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdr39u1Q5M8N4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdr39u1Q5M8N4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdr39u1Q5M8N4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdr39u1Q5M8N4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.81■□□□□ 0.6
Sdr39u1Q5M8N4 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.81■□□□□ 0.6
Sdr39u1Q5M8N4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sdr39u1Q5M8N4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sdr39u1Q5M8N4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdr39u1Q5M8N4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdr39u1Q5M8N4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdr39u1Q5M8N4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sdr39u1Q5M8N4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Sdr39u1Q5M8N4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdr39u1Q5M8N4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sdr39u1Q5M8N4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sdr39u1Q5M8N4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdr39u1Q5M8N4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdr39u1Q5M8N4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdr39u1Q5M8N4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sdr39u1Q5M8N4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.78■□□□□ 0.6
Sdr39u1Q5M8N4 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.78■□□□□ 0.6
Sdr39u1Q5M8N4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sdr39u1Q5M8N4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sdr39u1Q5M8N4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdr39u1Q5M8N4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sdr39u1Q5M8N4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdr39u1Q5M8N4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sdr39u1Q5M8N4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdr39u1Q5M8N4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.76■□□□□ 0.59
Sdr39u1Q5M8N4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sdr39u1Q5M8N4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdr39u1Q5M8N4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdr39u1Q5M8N4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdr39u1Q5M8N4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdr39u1Q5M8N4 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.72■□□□□ 0.59
Sdr39u1Q5M8N4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.72■□□□□ 0.59
Sdr39u1Q5M8N4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdr39u1Q5M8N4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 Gm24970-201ENSMUST00000175582 82 ntBASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.71■□□□□ 0.59
Sdr39u1Q5M8N4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sdr39u1Q5M8N4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdr39u1Q5M8N4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.7■□□□□ 0.58
Sdr39u1Q5M8N4 Gm9397-201ENSMUST00000200125 605 ntBASIC18.7■□□□□ 0.58
Sdr39u1Q5M8N4 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.7■□□□□ 0.58
Sdr39u1Q5M8N4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sdr39u1Q5M8N4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.69■□□□□ 0.58
Sdr39u1Q5M8N4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdr39u1Q5M8N4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdr39u1Q5M8N4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms