Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.09■■□□□ 1.77
HttP42859 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.09■■□□□ 1.77
HttP42859 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.09■■□□□ 1.77
HttP42859 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
HttP42859 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.09■■□□□ 1.77
HttP42859 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
HttP42859 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.08■■□□□ 1.76
HttP42859 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.07■■□□□ 1.76
HttP42859 Rps24-207ENSMUST00000224568 714 ntBASIC26.06■■□□□ 1.76
HttP42859 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HttP42859 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HttP42859 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
HttP42859 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.05■■□□□ 1.76
HttP42859 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HttP42859 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
HttP42859 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HttP42859 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HttP42859 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
HttP42859 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.03■■□□□ 1.76
HttP42859 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
HttP42859 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.02■■□□□ 1.76
HttP42859 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
HttP42859 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.01■■□□□ 1.75
HttP42859 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HttP42859 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HttP42859 Gm45102-201ENSMUST00000207427 857 ntBASIC26.01■■□□□ 1.75
HttP42859 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
HttP42859 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HttP42859 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HttP42859 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.99■■□□□ 1.75
HttP42859 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HttP42859 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
HttP42859 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.99■■□□□ 1.75
HttP42859 Gm15820-201ENSMUST00000201566 728 ntBASIC25.99■■□□□ 1.75
HttP42859 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.98■■□□□ 1.75
HttP42859 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
HttP42859 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HttP42859 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HttP42859 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
HttP42859 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HttP42859 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
HttP42859 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HttP42859 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.96■■□□□ 1.75
HttP42859 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.96■■□□□ 1.75
HttP42859 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HttP42859 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.95■■□□□ 1.74
HttP42859 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HttP42859 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HttP42859 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
HttP42859 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HttP42859 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HttP42859 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
HttP42859 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HttP42859 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HttP42859 Gm14117-201ENSMUST00000122417 843 ntBASIC25.91■■□□□ 1.74
HttP42859 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
HttP42859 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HttP42859 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.91■■□□□ 1.74
HttP42859 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.91■■□□□ 1.74
HttP42859 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HttP42859 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.9■■□□□ 1.74
HttP42859 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
HttP42859 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
HttP42859 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
HttP42859 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
HttP42859 Serp2-204ENSMUST00000228055 705 ntBASIC25.89■■□□□ 1.73
HttP42859 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
HttP42859 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
HttP42859 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
HttP42859 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
HttP42859 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
HttP42859 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
HttP42859 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.84■■□□□ 1.73
HttP42859 Gm13238-201ENSMUST00000117655 780 ntBASIC25.84■■□□□ 1.73
HttP42859 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
HttP42859 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HttP42859 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
HttP42859 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
HttP42859 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
HttP42859 Gm37136-201ENSMUST00000194368 194 ntBASIC25.81■■□□□ 1.72
HttP42859 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
HttP42859 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.8■■□□□ 1.72
HttP42859 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HttP42859 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
HttP42859 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HttP42859 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
HttP42859 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
HttP42859 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.78■■□□□ 1.72
HttP42859 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HttP42859 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.78■■□□□ 1.72
HttP42859 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
HttP42859 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
HttP42859 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.77■■□□□ 1.72
HttP42859 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.77■■□□□ 1.72
HttP42859 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HttP42859 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HttP42859 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.76■■□□□ 1.71
HttP42859 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HttP42859 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
HttP42859 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms