Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.75■■□□□ 1.55
Cxcl12P40224 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cxcl12P40224 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cxcl12P40224 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cxcl12P40224 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Cxcl12P40224 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.74■■□□□ 1.55
Cxcl12P40224 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Cxcl12P40224 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.73■■□□□ 1.55
Cxcl12P40224 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.73■■□□□ 1.55
Cxcl12P40224 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Cxcl12P40224 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Cxcl12P40224 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cxcl12P40224 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Cxcl12P40224 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Cxcl12P40224 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Cxcl12P40224 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Cxcl12P40224 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cxcl12P40224 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cxcl12P40224 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Cxcl12P40224 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Cxcl12P40224 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Cxcl12P40224 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.66■■□□□ 1.54
Cxcl12P40224 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.66■■□□□ 1.54
Cxcl12P40224 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cxcl12P40224 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cxcl12P40224 Gm9812-201ENSMUST00000061934 968 ntBASIC24.66■■□□□ 1.54
Cxcl12P40224 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.66■■□□□ 1.54
Cxcl12P40224 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
Cxcl12P40224 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cxcl12P40224 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.65■■□□□ 1.54
Cxcl12P40224 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Cxcl12P40224 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.64■■□□□ 1.54
Cxcl12P40224 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.64■■□□□ 1.53
Cxcl12P40224 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Cxcl12P40224 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Cxcl12P40224 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Cxcl12P40224 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.63■■□□□ 1.53
Cxcl12P40224 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Cxcl12P40224 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cxcl12P40224 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cxcl12P40224 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.62■■□□□ 1.53
Cxcl12P40224 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.62■■□□□ 1.53
Cxcl12P40224 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Cxcl12P40224 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.61■■□□□ 1.53
Cxcl12P40224 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Cxcl12P40224 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.6■■□□□ 1.53
Cxcl12P40224 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Cxcl12P40224 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Cxcl12P40224 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.59■■□□□ 1.53
Cxcl12P40224 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Cxcl12P40224 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Cxcl12P40224 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.57■■□□□ 1.52
Cxcl12P40224 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cxcl12P40224 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Cxcl12P40224 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Cxcl12P40224 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cxcl12P40224 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cxcl12P40224 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.55■■□□□ 1.52
Cxcl12P40224 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cxcl12P40224 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.54■■□□□ 1.52
Cxcl12P40224 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cxcl12P40224 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cxcl12P40224 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cxcl12P40224 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cxcl12P40224 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Cxcl12P40224 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cxcl12P40224 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Cxcl12P40224 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Cxcl12P40224 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cxcl12P40224 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cxcl12P40224 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cxcl12P40224 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.49■■□□□ 1.51
Cxcl12P40224 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.49■■□□□ 1.51
Cxcl12P40224 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cxcl12P40224 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Cxcl12P40224 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.48■■□□□ 1.51
Cxcl12P40224 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Cxcl12P40224 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cxcl12P40224 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cxcl12P40224 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cxcl12P40224 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cxcl12P40224 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cxcl12P40224 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.45■■□□□ 1.5
Cxcl12P40224 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cxcl12P40224 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Cxcl12P40224 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cxcl12P40224 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cxcl12P40224 Rps24-207ENSMUST00000224568 714 ntBASIC24.44■■□□□ 1.5
Cxcl12P40224 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cxcl12P40224 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cxcl12P40224 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.43■■□□□ 1.5
Cxcl12P40224 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.42■■□□□ 1.5
Cxcl12P40224 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.42■■□□□ 1.5
Cxcl12P40224 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.42■■□□□ 1.5
Cxcl12P40224 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Cxcl12P40224 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Cxcl12P40224 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cxcl12P40224 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.41■■□□□ 1.5
Cxcl12P40224 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cxcl12P40224 Terc-201ENSMUST00000082862 423 ntBASIC24.41■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms