Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PdgfbP31240 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PdgfbP31240 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PdgfbP31240 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PdgfbP31240 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.06■■□□□ 1.44
PdgfbP31240 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.06■■□□□ 1.44
PdgfbP31240 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PdgfbP31240 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PdgfbP31240 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.05■■□□□ 1.44
PdgfbP31240 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.05■■□□□ 1.44
PdgfbP31240 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PdgfbP31240 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PdgfbP31240 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.04■■□□□ 1.44
PdgfbP31240 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PdgfbP31240 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PdgfbP31240 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PdgfbP31240 Gm10420-201ENSMUST00000121713 882 ntBASIC24.01■■□□□ 1.43
PdgfbP31240 Gm5921-201ENSMUST00000075898 882 ntBASIC24.01■■□□□ 1.43
PdgfbP31240 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PdgfbP31240 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24■■□□□ 1.43
PdgfbP31240 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24■■□□□ 1.43
PdgfbP31240 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24■■□□□ 1.43
PdgfbP31240 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.99■■□□□ 1.43
PdgfbP31240 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfbP31240 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PdgfbP31240 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfbP31240 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfbP31240 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfbP31240 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.97■■□□□ 1.43
PdgfbP31240 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.97■■□□□ 1.43
PdgfbP31240 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfbP31240 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.96■■□□□ 1.43
PdgfbP31240 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfbP31240 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfbP31240 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.93■■□□□ 1.42
PdgfbP31240 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.93■■□□□ 1.42
PdgfbP31240 Gm9812-201ENSMUST00000061934 968 ntBASIC23.93■■□□□ 1.42
PdgfbP31240 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PdgfbP31240 Gm15546-201ENSMUST00000122095 826 ntBASIC23.92■■□□□ 1.42
PdgfbP31240 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.92■■□□□ 1.42
PdgfbP31240 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
PdgfbP31240 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfbP31240 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.91■■□□□ 1.42
PdgfbP31240 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfbP31240 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.9■■□□□ 1.42
PdgfbP31240 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfbP31240 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfbP31240 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfbP31240 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.89■■□□□ 1.41
PdgfbP31240 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfbP31240 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfbP31240 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PdgfbP31240 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfbP31240 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfbP31240 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfbP31240 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PdgfbP31240 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfbP31240 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PdgfbP31240 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfbP31240 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.84■■□□□ 1.41
PdgfbP31240 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PdgfbP31240 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PdgfbP31240 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PdgfbP31240 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
PdgfbP31240 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.82■■□□□ 1.4
PdgfbP31240 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfbP31240 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfbP31240 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.82■■□□□ 1.4
PdgfbP31240 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PdgfbP31240 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.81■■□□□ 1.4
PdgfbP31240 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PdgfbP31240 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PdgfbP31240 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PdgfbP31240 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PdgfbP31240 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PdgfbP31240 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.79■■□□□ 1.4
PdgfbP31240 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PdgfbP31240 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PdgfbP31240 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PdgfbP31240 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PdgfbP31240 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.77■■□□□ 1.4
PdgfbP31240 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.77■■□□□ 1.4
PdgfbP31240 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PdgfbP31240 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms