Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf9P20334 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf9P20334 Gm16437-201ENSMUST00000025669 507 ntBASIC18.65■□□□□ 0.58
Tnfrsf9P20334 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf9P20334 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf9P20334 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf9P20334 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfrsf9P20334 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Tnfrsf9P20334 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf9P20334 Gm30023-201ENSMUST00000197970 889 ntBASIC18.64■□□□□ 0.57
Tnfrsf9P20334 Gm9806-201ENSMUST00000051080 552 ntBASIC18.64■□□□□ 0.57
Tnfrsf9P20334 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf9P20334 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf9P20334 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf9P20334 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf9P20334 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf9P20334 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf9P20334 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf9P20334 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf9P20334 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
Tnfrsf9P20334 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.61■□□□□ 0.57
Tnfrsf9P20334 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf9P20334 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf9P20334 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf9P20334 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.6■□□□□ 0.57
Tnfrsf9P20334 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf9P20334 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf9P20334 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf9P20334 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tnfrsf9P20334 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf9P20334 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.58■□□□□ 0.57
Tnfrsf9P20334 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.58■□□□□ 0.57
Tnfrsf9P20334 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf9P20334 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf9P20334 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf9P20334 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf9P20334 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf9P20334 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tnfrsf9P20334 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf9P20334 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf9P20334 Gm27502-201ENSMUST00000183495 199 ntBASIC18.56■□□□□ 0.56
Tnfrsf9P20334 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tnfrsf9P20334 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf9P20334 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf9P20334 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf9P20334 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf9P20334 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf9P20334 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Tnfrsf9P20334 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf9P20334 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tnfrsf9P20334 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tnfrsf9P20334 Gm15039-201ENSMUST00000118914 875 ntBASIC18.52■□□□□ 0.56
Tnfrsf9P20334 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf9P20334 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tnfrsf9P20334 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf9P20334 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Tnfrsf9P20334 Gm7332-201ENSMUST00000118351 454 ntBASIC18.51■□□□□ 0.55
Tnfrsf9P20334 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.51■□□□□ 0.55
Tnfrsf9P20334 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfrsf9P20334 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf9P20334 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.49■□□□□ 0.55
Tnfrsf9P20334 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf9P20334 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.48■□□□□ 0.55
Tnfrsf9P20334 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf9P20334 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf9P20334 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf9P20334 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.47■□□□□ 0.55
Tnfrsf9P20334 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf9P20334 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.46■□□□□ 0.55
Tnfrsf9P20334 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf9P20334 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf9P20334 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf9P20334 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf9P20334 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf9P20334 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf9P20334 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tnfrsf9P20334 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms