Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC32.41■■■□□ 2.78
Tom1O88746 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC32.4■■■□□ 2.78
Tom1O88746 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC32.4■■■□□ 2.78
Tom1O88746 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC32.4■■■□□ 2.78
Tom1O88746 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Tom1O88746 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Tom1O88746 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Tom1O88746 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC32.39■■■□□ 2.78
Tom1O88746 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Tom1O88746 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
Tom1O88746 Gm37136-201ENSMUST00000194368 194 ntBASIC32.38■■■□□ 2.77
Tom1O88746 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Tom1O88746 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
Tom1O88746 Gm14117-201ENSMUST00000122417 843 ntBASIC32.36■■■□□ 2.77
Tom1O88746 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Tom1O88746 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Tom1O88746 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Tom1O88746 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC32.35■■■□□ 2.77
Tom1O88746 AC153911.1-201ENSMUST00000220378 758 ntBASIC32.35■■■□□ 2.77
Tom1O88746 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Tom1O88746 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Tom1O88746 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Tom1O88746 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC32.33■■■□□ 2.77
Tom1O88746 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
Tom1O88746 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC32.3■■■□□ 2.76
Tom1O88746 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Tom1O88746 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Tom1O88746 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC32.29■■■□□ 2.76
Tom1O88746 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
Tom1O88746 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Tom1O88746 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC32.28■■■□□ 2.76
Tom1O88746 Serp2-204ENSMUST00000228055 705 ntBASIC32.28■■■□□ 2.76
Tom1O88746 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Tom1O88746 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC32.28■■■□□ 2.76
Tom1O88746 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
Tom1O88746 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Tom1O88746 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC32.27■■■□□ 2.76
Tom1O88746 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Tom1O88746 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Tom1O88746 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
Tom1O88746 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
Tom1O88746 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Tom1O88746 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC32.25■■■□□ 2.75
Tom1O88746 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
Tom1O88746 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Tom1O88746 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Tom1O88746 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Tom1O88746 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Tom1O88746 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Tom1O88746 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC32.21■■■□□ 2.75
Tom1O88746 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Tom1O88746 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Tom1O88746 Gm9812-201ENSMUST00000061934 968 ntBASIC32.21■■■□□ 2.75
Tom1O88746 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Tom1O88746 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Tom1O88746 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Tom1O88746 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
Tom1O88746 Gm5297-201ENSMUST00000198555 1171 ntBASIC32.18■■■□□ 2.74
Tom1O88746 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Tom1O88746 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.16■■■□□ 2.74
Tom1O88746 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC32.16■■■□□ 2.74
Tom1O88746 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Tom1O88746 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
Tom1O88746 AC122317.2-201ENSMUST00000218708 1248 ntBASIC32.15■■■□□ 2.74
Tom1O88746 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Tom1O88746 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
Tom1O88746 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Tom1O88746 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Tom1O88746 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC32.13■■■□□ 2.73
Tom1O88746 Gm43566-201ENSMUST00000196851 808 ntBASIC32.13■■■□□ 2.73
Tom1O88746 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tom1O88746 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC32.12■■■□□ 2.73
Tom1O88746 Gm13238-201ENSMUST00000117655 780 ntBASIC32.12■■■□□ 2.73
Tom1O88746 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Tom1O88746 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Tom1O88746 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
Tom1O88746 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
Tom1O88746 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
Tom1O88746 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Tom1O88746 Gm42501-201ENSMUST00000200220 1026 ntBASIC32.1■■■□□ 2.73
Tom1O88746 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC32.1■■■□□ 2.73
Tom1O88746 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Tom1O88746 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Tom1O88746 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC32.09■■■□□ 2.73
Tom1O88746 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Tom1O88746 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Tom1O88746 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC32.09■■■□□ 2.73
Tom1O88746 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Tom1O88746 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC32.08■■■□□ 2.73
Tom1O88746 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Tom1O88746 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC32.08■■■□□ 2.73
Tom1O88746 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC32.08■■■□□ 2.73
Tom1O88746 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC32.08■■■□□ 2.73
Tom1O88746 Gm9959-201ENSMUST00000068277 390 ntBASIC32.08■■■□□ 2.73
Tom1O88746 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Tom1O88746 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Tom1O88746 Gm45444-201ENSMUST00000211394 898 ntBASIC32.06■■■□□ 2.72
Tom1O88746 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC32.06■■■□□ 2.72
Tom1O88746 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Tom1O88746 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms