Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tnfrsf17O88472 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tnfrsf17O88472 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tnfrsf17O88472 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Tnfrsf17O88472 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tnfrsf17O88472 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.13■■□□□ 1.13
Tnfrsf17O88472 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.13■■□□□ 1.13
Tnfrsf17O88472 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Tnfrsf17O88472 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tnfrsf17O88472 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tnfrsf17O88472 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tnfrsf17O88472 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tnfrsf17O88472 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tnfrsf17O88472 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tnfrsf17O88472 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tnfrsf17O88472 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
Tnfrsf17O88472 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tnfrsf17O88472 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tnfrsf17O88472 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.09■■□□□ 1.13
Tnfrsf17O88472 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Tnfrsf17O88472 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tnfrsf17O88472 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Tnfrsf17O88472 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Tnfrsf17O88472 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tnfrsf17O88472 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.07■■□□□ 1.12
Tnfrsf17O88472 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tnfrsf17O88472 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.06■■□□□ 1.12
Tnfrsf17O88472 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.06■■□□□ 1.12
Tnfrsf17O88472 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.06■■□□□ 1.12
Tnfrsf17O88472 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.06■■□□□ 1.12
Tnfrsf17O88472 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Tnfrsf17O88472 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Tnfrsf17O88472 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.05■■□□□ 1.12
Tnfrsf17O88472 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tnfrsf17O88472 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tnfrsf17O88472 Gm15820-201ENSMUST00000201566 728 ntBASIC22.04■■□□□ 1.12
Tnfrsf17O88472 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Tnfrsf17O88472 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Tnfrsf17O88472 Gm45102-201ENSMUST00000207427 857 ntBASIC22.03■■□□□ 1.12
Tnfrsf17O88472 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tnfrsf17O88472 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Tnfrsf17O88472 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tnfrsf17O88472 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.02■■□□□ 1.12
Tnfrsf17O88472 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.01■■□□□ 1.11
Tnfrsf17O88472 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.01■■□□□ 1.11
Tnfrsf17O88472 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tnfrsf17O88472 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tnfrsf17O88472 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Tnfrsf17O88472 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tnfrsf17O88472 Gm9812-201ENSMUST00000061934 968 ntBASIC22■■□□□ 1.11
Tnfrsf17O88472 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Tnfrsf17O88472 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tnfrsf17O88472 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Tnfrsf17O88472 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf17O88472 Gm14117-201ENSMUST00000122417 843 ntBASIC21.97■■□□□ 1.11
Tnfrsf17O88472 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf17O88472 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.97■■□□□ 1.11
Tnfrsf17O88472 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.97■■□□□ 1.11
Tnfrsf17O88472 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf17O88472 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf17O88472 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tnfrsf17O88472 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.96■■□□□ 1.11
Tnfrsf17O88472 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Tnfrsf17O88472 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.96■■□□□ 1.11
Tnfrsf17O88472 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Tnfrsf17O88472 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf17O88472 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf17O88472 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.95■■□□□ 1.1
Tnfrsf17O88472 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf17O88472 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tnfrsf17O88472 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.94■■□□□ 1.1
Tnfrsf17O88472 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf17O88472 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf17O88472 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf17O88472 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Tnfrsf17O88472 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.93■■□□□ 1.1
Tnfrsf17O88472 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tnfrsf17O88472 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tnfrsf17O88472 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.92■■□□□ 1.1
Tnfrsf17O88472 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.92■■□□□ 1.1
Tnfrsf17O88472 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tnfrsf17O88472 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tnfrsf17O88472 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.92■■□□□ 1.1
Tnfrsf17O88472 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tnfrsf17O88472 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.91■■□□□ 1.1
Tnfrsf17O88472 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Tnfrsf17O88472 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tnfrsf17O88472 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf17O88472 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Tnfrsf17O88472 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.9■■□□□ 1.1
Tnfrsf17O88472 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf17O88472 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Tnfrsf17O88472 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms