Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Tgfbr3O88393 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.5■■□□□ 1.19
Tgfbr3O88393 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Tgfbr3O88393 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tgfbr3O88393 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.49■■□□□ 1.19
Tgfbr3O88393 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tgfbr3O88393 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
Tgfbr3O88393 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tgfbr3O88393 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tgfbr3O88393 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tgfbr3O88393 Zxda-201ENSMUST00000117281 2621 ntBASIC22.46■■□□□ 1.19
Tgfbr3O88393 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tgfbr3O88393 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Tgfbr3O88393 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Tgfbr3O88393 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tgfbr3O88393 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tgfbr3O88393 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tgfbr3O88393 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tgfbr3O88393 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tgfbr3O88393 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tgfbr3O88393 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Tgfbr3O88393 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tgfbr3O88393 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.43■■□□□ 1.18
Tgfbr3O88393 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tgfbr3O88393 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tgfbr3O88393 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.42■■□□□ 1.18
Tgfbr3O88393 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.42■■□□□ 1.18
Tgfbr3O88393 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tgfbr3O88393 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Tgfbr3O88393 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tgfbr3O88393 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tgfbr3O88393 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tgfbr3O88393 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.41■■□□□ 1.18
Tgfbr3O88393 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Tgfbr3O88393 Gm14523-201ENSMUST00000117260 558 ntBASIC22.4■■□□□ 1.18
Tgfbr3O88393 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Tgfbr3O88393 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tgfbr3O88393 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.4■■□□□ 1.18
Tgfbr3O88393 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tgfbr3O88393 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tgfbr3O88393 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.39■■□□□ 1.17
Tgfbr3O88393 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Tgfbr3O88393 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tgfbr3O88393 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tgfbr3O88393 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.38■■□□□ 1.17
Tgfbr3O88393 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.38■■□□□ 1.17
Tgfbr3O88393 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tgfbr3O88393 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
Tgfbr3O88393 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tgfbr3O88393 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tgfbr3O88393 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tgfbr3O88393 Gm9812-201ENSMUST00000061934 968 ntBASIC22.37■■□□□ 1.17
Tgfbr3O88393 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tgfbr3O88393 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tgfbr3O88393 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tgfbr3O88393 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tgfbr3O88393 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.36■■□□□ 1.17
Tgfbr3O88393 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tgfbr3O88393 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.35■■□□□ 1.17
Tgfbr3O88393 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.35■■□□□ 1.17
Tgfbr3O88393 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tgfbr3O88393 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tgfbr3O88393 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.32■■□□□ 1.16
Tgfbr3O88393 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Tgfbr3O88393 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tgfbr3O88393 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tgfbr3O88393 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tgfbr3O88393 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tgfbr3O88393 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.29■■□□□ 1.16
Tgfbr3O88393 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tgfbr3O88393 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tgfbr3O88393 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.28■■□□□ 1.16
Tgfbr3O88393 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.28■■□□□ 1.16
Tgfbr3O88393 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Tgfbr3O88393 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.28■■□□□ 1.16
Tgfbr3O88393 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tgfbr3O88393 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.27■■□□□ 1.16
Tgfbr3O88393 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Tgfbr3O88393 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tgfbr3O88393 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tgfbr3O88393 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tgfbr3O88393 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Tgfbr3O88393 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tgfbr3O88393 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Tgfbr3O88393 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.25■■□□□ 1.15
Tgfbr3O88393 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Tgfbr3O88393 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.24■■□□□ 1.15
Tgfbr3O88393 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tgfbr3O88393 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.23■■□□□ 1.15
Tgfbr3O88393 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tgfbr3O88393 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tgfbr3O88393 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tgfbr3O88393 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tgfbr3O88393 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.22■■□□□ 1.15
Tgfbr3O88393 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Tgfbr3O88393 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tgfbr3O88393 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
Tgfbr3O88393 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tgfbr3O88393 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.21■■□□□ 1.15
Tgfbr3O88393 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms