Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ube4aE9Q735 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Ube4aE9Q735 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ube4aE9Q735 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.58■■■□□ 2.17
Ube4aE9Q735 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ube4aE9Q735 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.58■■■□□ 2.17
Ube4aE9Q735 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ube4aE9Q735 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ube4aE9Q735 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ube4aE9Q735 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ube4aE9Q735 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.54■■■□□ 2.16
Ube4aE9Q735 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ube4aE9Q735 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ube4aE9Q735 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ube4aE9Q735 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.53■■■□□ 2.16
Ube4aE9Q735 Gm12366-201ENSMUST00000121722 873 ntBASIC28.53■■■□□ 2.16
Ube4aE9Q735 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.53■■■□□ 2.16
Ube4aE9Q735 Gm9812-201ENSMUST00000061934 968 ntBASIC28.53■■■□□ 2.16
Ube4aE9Q735 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.53■■■□□ 2.16
Ube4aE9Q735 Gm5786-201ENSMUST00000085368 882 ntBASIC28.53■■■□□ 2.16
Ube4aE9Q735 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ube4aE9Q735 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ube4aE9Q735 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.52■■■□□ 2.16
Ube4aE9Q735 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ube4aE9Q735 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ube4aE9Q735 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Ube4aE9Q735 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Ube4aE9Q735 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.5■■■□□ 2.15
Ube4aE9Q735 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ube4aE9Q735 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ube4aE9Q735 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ube4aE9Q735 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.49■■■□□ 2.15
Ube4aE9Q735 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ube4aE9Q735 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.49■■■□□ 2.15
Ube4aE9Q735 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Ube4aE9Q735 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ube4aE9Q735 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ube4aE9Q735 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Ube4aE9Q735 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ube4aE9Q735 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Ube4aE9Q735 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.48■■■□□ 2.15
Ube4aE9Q735 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ube4aE9Q735 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ube4aE9Q735 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Ube4aE9Q735 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ube4aE9Q735 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Ube4aE9Q735 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ube4aE9Q735 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ube4aE9Q735 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.46■■■□□ 2.15
Ube4aE9Q735 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.46■■■□□ 2.15
Ube4aE9Q735 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.46■■■□□ 2.15
Ube4aE9Q735 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.45■■■□□ 2.15
Ube4aE9Q735 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Ube4aE9Q735 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ube4aE9Q735 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.45■■■□□ 2.14
Ube4aE9Q735 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ube4aE9Q735 Amer2-203ENSMUST00000225247 2662 ntBASIC28.44■■■□□ 2.14
Ube4aE9Q735 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ube4aE9Q735 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Ube4aE9Q735 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ube4aE9Q735 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ube4aE9Q735 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.43■■■□□ 2.14
Ube4aE9Q735 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ube4aE9Q735 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ube4aE9Q735 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ube4aE9Q735 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ube4aE9Q735 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Ube4aE9Q735 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ube4aE9Q735 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.39■■■□□ 2.14
Ube4aE9Q735 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
Ube4aE9Q735 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.38■■■□□ 2.13
Ube4aE9Q735 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ube4aE9Q735 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ube4aE9Q735 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Ube4aE9Q735 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Ube4aE9Q735 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ube4aE9Q735 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ube4aE9Q735 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Ube4aE9Q735 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC28.36■■■□□ 2.13
Ube4aE9Q735 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ube4aE9Q735 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ube4aE9Q735 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ube4aE9Q735 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ube4aE9Q735 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ube4aE9Q735 Gm27502-201ENSMUST00000183495 199 ntBASIC28.35■■■□□ 2.13
Ube4aE9Q735 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Ube4aE9Q735 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Ube4aE9Q735 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ube4aE9Q735 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Ube4aE9Q735 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
Ube4aE9Q735 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ube4aE9Q735 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ube4aE9Q735 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.32■■■□□ 2.12
Ube4aE9Q735 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.32■■■□□ 2.12
Ube4aE9Q735 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
Ube4aE9Q735 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ube4aE9Q735 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ube4aE9Q735 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.3■■■□□ 2.12
Ube4aE9Q735 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ube4aE9Q735 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms