Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv26A0A0B4J1P5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trbv26A0A0B4J1P5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv26A0A0B4J1P5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv26A0A0B4J1P5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv26A0A0B4J1P5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv26A0A0B4J1P5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Gm37136-201ENSMUST00000194368 194 ntBASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv26A0A0B4J1P5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv26A0A0B4J1P5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv26A0A0B4J1P5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv26A0A0B4J1P5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv26A0A0B4J1P5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv26A0A0B4J1P5 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv26A0A0B4J1P5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Trbv26A0A0B4J1P5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv26A0A0B4J1P5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv26A0A0B4J1P5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv26A0A0B4J1P5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv26A0A0B4J1P5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv26A0A0B4J1P5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.11■□□□□ 0.65
Trbv26A0A0B4J1P5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv26A0A0B4J1P5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv26A0A0B4J1P5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv26A0A0B4J1P5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trbv26A0A0B4J1P5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trbv26A0A0B4J1P5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv26A0A0B4J1P5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.07■□□□□ 0.64
Trbv26A0A0B4J1P5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.06■□□□□ 0.64
Trbv26A0A0B4J1P5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbv26A0A0B4J1P5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trbv26A0A0B4J1P5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Trbv26A0A0B4J1P5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv26A0A0B4J1P5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv26A0A0B4J1P5 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms