Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.93■□□□□ 0.94
Gm28557A0A087WQQ0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28557A0A087WQQ0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.92■□□□□ 0.94
Gm28557A0A087WQQ0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.92■□□□□ 0.94
Gm28557A0A087WQQ0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28557A0A087WQQ0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28557A0A087WQQ0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gm28557A0A087WQQ0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28557A0A087WQQ0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.9■□□□□ 0.94
Gm28557A0A087WQQ0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Gm28557A0A087WQQ0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28557A0A087WQQ0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28557A0A087WQQ0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28557A0A087WQQ0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.88■□□□□ 0.93
Gm28557A0A087WQQ0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.88■□□□□ 0.93
Gm28557A0A087WQQ0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Gm28557A0A087WQQ0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28557A0A087WQQ0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28557A0A087WQQ0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28557A0A087WQQ0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28557A0A087WQQ0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.86■□□□□ 0.93
Gm28557A0A087WQQ0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.86■□□□□ 0.93
Gm28557A0A087WQQ0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28557A0A087WQQ0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28557A0A087WQQ0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28557A0A087WQQ0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28557A0A087WQQ0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.84■□□□□ 0.93
Gm28557A0A087WQQ0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Gm28557A0A087WQQ0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28557A0A087WQQ0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28557A0A087WQQ0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.83■□□□□ 0.93
Gm28557A0A087WQQ0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28557A0A087WQQ0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28557A0A087WQQ0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28557A0A087WQQ0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.82■□□□□ 0.92
Gm28557A0A087WQQ0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28557A0A087WQQ0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.82■□□□□ 0.92
Gm28557A0A087WQQ0 Zfp131-205ENSMUST00000223812 663 ntBASIC20.81■□□□□ 0.92
Gm28557A0A087WQQ0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Gm28557A0A087WQQ0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28557A0A087WQQ0 Particl-201ENSMUST00000205370 1560 ntBASIC20.8■□□□□ 0.92
Gm28557A0A087WQQ0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28557A0A087WQQ0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.8■□□□□ 0.92
Gm28557A0A087WQQ0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28557A0A087WQQ0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28557A0A087WQQ0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28557A0A087WQQ0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm28557A0A087WQQ0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Gm28557A0A087WQQ0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm28557A0A087WQQ0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm28557A0A087WQQ0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28557A0A087WQQ0 Gm9397-201ENSMUST00000200125 605 ntBASIC20.76■□□□□ 0.91
Gm28557A0A087WQQ0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28557A0A087WQQ0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28557A0A087WQQ0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28557A0A087WQQ0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm28557A0A087WQQ0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28557A0A087WQQ0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Gm28557A0A087WQQ0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28557A0A087WQQ0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm28557A0A087WQQ0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Gm28557A0A087WQQ0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28557A0A087WQQ0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28557A0A087WQQ0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm28557A0A087WQQ0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.74■□□□□ 0.91
Gm28557A0A087WQQ0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.73■□□□□ 0.91
Gm28557A0A087WQQ0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28557A0A087WQQ0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm28557A0A087WQQ0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28557A0A087WQQ0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28557A0A087WQQ0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28557A0A087WQQ0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28557A0A087WQQ0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28557A0A087WQQ0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm28557A0A087WQQ0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28557A0A087WQQ0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gm28557A0A087WQQ0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm28557A0A087WQQ0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28557A0A087WQQ0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Gm28557A0A087WQQ0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gm28557A0A087WQQ0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28557A0A087WQQ0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28557A0A087WQQ0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28557A0A087WQQ0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28557A0A087WQQ0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28557A0A087WQQ0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28557A0A087WQQ0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm28557A0A087WQQ0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Gm28557A0A087WQQ0 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.68■□□□□ 0.9
Gm28557A0A087WQQ0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28557A0A087WQQ0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Gm28557A0A087WQQ0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms