Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav12-3A0A075B648 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12-3A0A075B648 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12-3A0A075B648 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12-3A0A075B648 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-3A0A075B648 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12-3A0A075B648 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-3A0A075B648 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-3A0A075B648 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12-3A0A075B648 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12-3A0A075B648 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-3A0A075B648 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-3A0A075B648 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-3A0A075B648 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-3A0A075B648 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav12-3A0A075B648 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav12-3A0A075B648 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav12-3A0A075B648 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12-3A0A075B648 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12-3A0A075B648 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12-3A0A075B648 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav12-3A0A075B648 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12-3A0A075B648 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
Trav12-3A0A075B648 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12-3A0A075B648 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-3A0A075B648 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-3A0A075B648 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-3A0A075B648 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-3A0A075B648 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-3A0A075B648 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12-3A0A075B648 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-3A0A075B648 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-3A0A075B648 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-3A0A075B648 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-3A0A075B648 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-3A0A075B648 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav12-3A0A075B648 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-3A0A075B648 Notumos-201ENSMUST00000151998 2659 ntBASIC16.96■□□□□ 0.31
Trav12-3A0A075B648 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12-3A0A075B648 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav12-3A0A075B648 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav12-3A0A075B648 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-3A0A075B648 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-3A0A075B648 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-3A0A075B648 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-3A0A075B648 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-3A0A075B648 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav12-3A0A075B648 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-3A0A075B648 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-3A0A075B648 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-3A0A075B648 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-3A0A075B648 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-3A0A075B648 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav12-3A0A075B648 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav12-3A0A075B648 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav12-3A0A075B648 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-3A0A075B648 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-3A0A075B648 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav12-3A0A075B648 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav12-3A0A075B648 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-3A0A075B648 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-3A0A075B648 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav12-3A0A075B648 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-3A0A075B648 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav12-3A0A075B648 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-3A0A075B648 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-3A0A075B648 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Trav12-3A0A075B648 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-3A0A075B648 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav12-3A0A075B648 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav12-3A0A075B648 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms