Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RN7SL132P-201ENST00000478131 296 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AL132838.2-201ENST00000492041 314 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 RNU6-1092P-201ENST00000516955 87 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 MYL12BP1-201ENST00000569826 507 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 NUTF2P8-201ENST00000604593 363 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AL445363.3-201ENST00000623080 671 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AL445487.1-201ENST00000415694 1580 ntBASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RTCBQ9Y3I0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RNU6-890P-201ENST00000384121 107 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 Y_RNA.463-201ENST00000384271 102 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 MIR554-201ENST00000384874 96 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RNU6-328P-201ENST00000390887 106 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RNA5SP219-201ENST00000390940 113 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RNU6-550P-201ENST00000391057 101 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RPL30P2-201ENST00000414021 291 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC005094.1-201ENST00000440420 368 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RPS17P13-201ENST00000448974 407 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 snoU13.22-201ENST00000459428 104 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC128713.1-201ENST00000471495 306 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 Y_RNA.661-201ENST00000516003 99 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RNU6-1016P-201ENST00000516689 94 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC124068.1-201ENST00000563131 678 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 MIR4444-1-201ENST00000581696 74 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 MIR4444-2-201ENST00000584390 74 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 BNIP3P16-201ENST00000589779 534 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC006157.1-201ENST00000611750 366 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 PISRT1.1-201ENST00000616930 107 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC140479.6-201ENST00000633535 357 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC103710.2-202ENST00000641454 2853 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 ADAM5-202ENST00000399789 1942 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AL158163.1-201ENST00000603915 1649 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 AC092376.2-201ENST00000622621 4116 ntBASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RTCBQ9Y3I0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AC073136.1-201ENST00000449426 2884 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AL139095.3-201ENST00000419672 1203 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 CALM2P2-201ENST00000428512 440 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AL117339.2-201ENST00000430475 180 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 RPL35AP22-201ENST00000436855 335 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AC005008.1-201ENST00000456151 612 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AC108078.2-201ENST00000510750 236 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AL359219.2-201ENST00000555184 348 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 MIR4293-201ENST00000584305 78 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 PRR13P7-201ENST00000605538 430 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AC011890.2-201ENST00000613393 294 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RTCBQ9Y3I0 AC027228.2-201ENST00000567141 2154 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms