Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.8□□□□□ -1.8
LRFN1Q9P244 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
LRFN1Q9P244 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN1Q9P244 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN1Q9P244 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN1Q9P244 RNU6-108P-201ENST00000365558 107 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 RNA5SP39-201ENST00000411245 120 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 CYCSP19-201ENST00000411715 316 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 RPS3AP17-201ENST00000472594 777 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC108078.1-201ENST00000508073 725 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 PPBPP1-201ENST00000510807 373 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 SCARNA24.1-201ENST00000516465 137 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 HMGB1P41-201ENST00000520234 440 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 AP006587.4-201ENST00000526053 529 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AL845331.3-202ENST00000562856 261 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRFN1Q9P244 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
LRFN1Q9P244 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN1Q9P244 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN1Q9P244 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN1Q9P244 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC073343.1-201ENST00000328239 651 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 RNU1-15P-201ENST00000353977 144 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 SNORA60-201ENST00000362396 134 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 Y_RNA.22-201ENST00000362492 102 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 RNU6-181P-201ENST00000363225 107 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 RNU6-282P-201ENST00000365357 103 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN1Q9P244 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN1Q9P244 RNU6-741P-201ENST00000383889 107 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 RNU6-1103P-201ENST00000384150 107 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 HSPE1P12-201ENST00000412576 301 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AF274854.1-201ENST00000413236 615 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 MTCO2P11-201ENST00000431069 680 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 RPL7P28-201ENST00000437739 740 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC006011.1-201ENST00000442758 349 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AL358232.1-201ENST00000448030 501 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC132479.1-201ENST00000449160 144 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC013267.1-201ENST00000458227 267 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC023598.1-201ENST00000472521 361 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC010460.1-201ENST00000507087 466 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 TTC39CP1-201ENST00000512513 755 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC010493.1-201ENST00000513479 292 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 RNU6-720P-201ENST00000516363 108 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 RNU6-445P-201ENST00000516949 107 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 OR5G4P-201ENST00000525251 760 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC063950.1-201ENST00000552036 308 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 EIF1P4-201ENST00000572664 335 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC053481.4-201ENST00000583164 216 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC067852.3-201ENST00000589177 561 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AC002545.1-201ENST00000592511 181 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AL021997.1-201ENST00000605757 193 ntBASIC3.78□□□□□ -1.8
LRFN1Q9P244 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRFN1Q9P244 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.78□□□□□ -1.8
LRFN1Q9P244 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms