Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC010680.1-201ENST00000590024 3590 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AL161431.1-201ENST00000618966 4205 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 RNU6-1035P-201ENST00000384477 107 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 UBE2FP1-201ENST00000416536 447 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 USP9YP26-201ENST00000421008 661 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AL512844.2-201ENST00000433990 593 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC092573.2-201ENST00000434546 243 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 BMI1P1-201ENST00000445879 941 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 DSTNP2-201ENST00000504533 515 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 OR5BM1P-201ENST00000512021 366 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 RNA5SP76-201ENST00000516277 87 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 RNU6-1003P-201ENST00000517099 105 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AP000907.2-201ENST00000530827 353 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC026333.2-201ENST00000542164 106 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC025884.1-201ENST00000556034 378 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 MIR7844-201ENST00000616161 122 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 ZYXP1-201ENST00000617638 118 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 MIR6810-201ENST00000622701 70 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AP003355.3-201ENST00000623465 114 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC079416.3-201ENST00000624479 549 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 GABRG2-229ENST00000641017 3628 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 RNU5A-8P-201ENST00000364102 114 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 RPL21P65-201ENST00000406094 466 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AL451054.2-201ENST00000420896 202 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 HMGN2P30-201ENST00000423237 256 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC004975.1-201ENST00000428733 208 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 MTND5P25-201ENST00000430499 799 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 RPL37P21-201ENST00000435890 276 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 NOTCH2P1-201ENST00000443481 624 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 GSTA11P-201ENST00000452866 669 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC013267.1-201ENST00000458227 267 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 RPL30P6-201ENST00000475925 342 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 RPS15AP36-201ENST00000492022 382 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 NPM1P41-201ENST00000512920 831 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 Y_RNA.717-201ENST00000517106 92 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC090616.2-202ENST00000584248 222 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AP000403.1-201ENST00000603349 851 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC103710.4-201ENST00000609301 899 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC140725.3-201ENST00000616193 880 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 SNHG22-203ENST00000617833 660 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AP000770.2-201ENST00000623694 100 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
CHCHD3Q9NX63 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 MTND4P16-201ENST00000466108 1367 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 SPRR2C-201ENST00000290702 219 ntBASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHCHD3Q9NX63 RNU6-501P-201ENST00000364072 100 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms