Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 AP004289.2-201ENST00000444413 1457 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.8□□□□□ -1.96
LITAFQ99732 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LITAFQ99732 RNU4-79P-201ENST00000362764 141 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 U3.12-201ENST00000364498 214 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 Y_RNA.373-201ENST00000365600 103 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LITAFQ99732 RNU6-831P-201ENST00000384548 107 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 MIR3065-201ENST00000390137 79 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RNU6-550P-201ENST00000391057 101 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RNU4-46P-201ENST00000410818 138 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RPS20P15-201ENST00000412792 311 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RPL30P2-201ENST00000414021 291 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC016831.2-201ENST00000417179 352 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 ARL5AP1-201ENST00000418991 388 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AL139095.3-201ENST00000419672 1203 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.8□□□□□ -1.96
LITAFQ99732 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 OR1H1P-201ENST00000448731 937 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.8□□□□□ -1.96
LITAFQ99732 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC2.8□□□□□ -1.96
LITAFQ99732 SNORD108-201ENST00000459332 71 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC072052.1-201ENST00000496556 306 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 CCDC34P1-201ENST00000507441 517 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.8□□□□□ -1.96
LITAFQ99732 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.8□□□□□ -1.96
LITAFQ99732 FAM206BP-201ENST00000510179 541 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RNA5SP473-201ENST00000516402 125 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RNU6-1038P-201ENST00000516516 104 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RNU6-685P-201ENST00000517088 95 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RN7SKP256-201ENST00000517201 314 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.8□□□□□ -1.96
LITAFQ99732 IGHVIII-67-4-201ENST00000524281 296 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.8□□□□□ -1.96
LITAFQ99732 AL137161.1-201ENST00000532231 390 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.8□□□□□ -1.96
LITAFQ99732 GNRHR2P1-201ENST00000555315 631 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AL121576.1-201ENST00000556055 276 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.8□□□□□ -1.96
LITAFQ99732 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.8□□□□□ -1.96
LITAFQ99732 AC005668.1-201ENST00000571142 476 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.8□□□□□ -1.96
LITAFQ99732 AC087763.1-201ENST00000603391 286 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC079587.1-201ENST00000603846 277 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AL021997.2-201ENST00000615674 271 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 U7.8-201ENST00000619968 63 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 RMST_7.1-201ENST00000621935 268 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AL357559.1-201ENST00000622228 274 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 AC007998.5-201ENST00000622938 237 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 IPO8P1-201ENST00000455509 3109 ntBASIC2.8□□□□□ -1.96
LITAFQ99732 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LITAFQ99732 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LITAFQ99732 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 AL365440.1-201ENST00000436135 2167 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 Y_RNA.184-201ENST00000363884 108 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 SNORA51.2-201ENST00000364595 132 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 Y_RNA.378-201ENST00000365652 113 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
LITAFQ99732 AL583835.1-201ENST00000399570 407 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.79□□□□□ -1.96
LITAFQ99732 MTATP6P4-201ENST00000427725 675 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 AC079780.1-201ENST00000428259 207 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 CALM2P2-201ENST00000428512 440 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 RPL21P112-201ENST00000434403 463 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 KCTD9P3-201ENST00000434597 1169 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 RPL26P6-201ENST00000440913 438 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.79□□□□□ -1.96
LITAFQ99732 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.79□□□□□ -1.96
LITAFQ99732 RNU6-1208P-201ENST00000459588 107 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 AC018638.3-201ENST00000461273 132 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 RPL21P8-201ENST00000465083 535 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 RPL7P19-201ENST00000469948 618 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.79□□□□□ -1.96
LITAFQ99732 RPS27AP13-201ENST00000498403 237 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.79□□□□□ -1.96
LITAFQ99732 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC2.79□□□□□ -1.96
LITAFQ99732 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.79□□□□□ -1.96
LITAFQ99732 BTF3P13-201ENST00000513224 490 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 RNU6-277P-201ENST00000516272 106 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 RNA5SP92-201ENST00000516437 110 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.79□□□□□ -1.96
LITAFQ99732 AP004371.1-201ENST00000525240 214 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LITAFQ99732 RANP3-201ENST00000530970 276 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.79□□□□□ -1.96
LITAFQ99732 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.79□□□□□ -1.96
LITAFQ99732 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC2.79□□□□□ -1.96
LITAFQ99732 AC026464.5-201ENST00000562497 722 ntBASIC2.79□□□□□ -1.96
LITAFQ99732 SNORD84-203ENST00000584275 78 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms