Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 OR5AK4P-201ENST00000635912 903 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 AC099654.12-201ENST00000639868 649 ntBASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC33Q8N5R6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC092326.2-201ENST00000624772 1561 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 GABPAP-201ENST00000419271 1356 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 RNU6-1284P-201ENST00000363701 100 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 Y_RNA.333-201ENST00000365274 102 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 SNORA36C-201ENST00000384289 132 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 Y_RNA.516-201ENST00000384541 124 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 Y_RNA.599-201ENST00000410489 109 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 SNORA57.3-201ENST00000411095 141 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC093578.1-201ENST00000415219 368 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 CRYBB2P1-203ENST00000415709 538 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 ATP5HP2-201ENST00000433885 485 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 FABP3P2-201ENST00000453169 399 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 MTCO3P20-201ENST00000454926 688 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 C1DP4-201ENST00000455429 424 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC106872.2-201ENST00000494303 480 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC114797.1-201ENST00000514003 728 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 SNORA31.8-201ENST00000516327 108 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC011979.2-201ENST00000527568 352 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC123904.3-201ENST00000547218 814 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC087883.1-201ENST00000551882 391 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 MIR3944-201ENST00000581277 108 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AL022154.1-201ENST00000604698 785 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC069200.1-201ENST00000609511 323 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 AC012531.5-201ENST00000611375 151 ntBASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC33Q8N5R6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 SNORD46.1-201ENST00000364139 104 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 RNU6-1103P-201ENST00000384150 107 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 MIR449B-201ENST00000384995 97 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AL359634.1-202ENST00000404721 284 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 GSTA9P-201ENST00000406231 611 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC087650.1-201ENST00000431445 468 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AL662791.1-201ENST00000441992 928 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 MTND1P1-201ENST00000445453 368 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 GAPDHP27-201ENST00000447427 1020 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AL049714.1-201ENST00000466686 347 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 RPL7P49-201ENST00000471402 708 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 VN1R17P-201ENST00000472048 1090 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 RPL9P33-201ENST00000484311 566 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 HMGB1P29-201ENST00000505659 499 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC010342.1-201ENST00000514047 877 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AC105224.1-201ENST00000587055 421 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 MIR98-201ENST00000606724 119 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 SNHG22-203ENST00000617833 660 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 CR848007.1-201ENST00000442354 1699 ntBASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC33Q8N5R6 SDAD1P2-201ENST00000441308 2028 ntBASIC4.05□□□□□ -1.76
CCDC33Q8N5R6 ZNF285B-201ENST00000561698 1767 ntBASIC4.05□□□□□ -1.76
CCDC33Q8N5R6 HSPE1P11-201ENST00000339579 310 ntBASIC4.05□□□□□ -1.76
CCDC33Q8N5R6 Y_RNA.296-201ENST00000364930 108 ntBASIC4.05□□□□□ -1.76
CCDC33Q8N5R6 RNU6-169P-201ENST00000365336 107 ntBASIC4.05□□□□□ -1.76
CCDC33Q8N5R6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC33Q8N5R6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms