Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC090132.2-201ENST00000615881 347 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AP002791.1-201ENST00000623291 381 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 MIR3651-201ENST00000630427 90 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 OR5H6-203ENST00000642105 978 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AL353746.1-201ENST00000566293 6881 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 CCT4P2-201ENST00000233836 1548 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AP000568.1-201ENST00000282964 442 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 Z99755.1-201ENST00000414048 380 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 VPS26BP1-201ENST00000417155 755 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC005005.2-201ENST00000420779 380 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 RPL23AP82-202ENST00000427528 469 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC005326.1-201ENST00000429197 123 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AL512844.2-201ENST00000433990 593 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC112198.1-201ENST00000505369 1220 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 OR5G4P-201ENST00000525251 760 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AP000857.1-201ENST00000532151 543 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 LRRC34P1-201ENST00000542742 915 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC002545.1-201ENST00000592511 181 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF39Q86UA1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AL138880.2-201ENST00000616214 239 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC110801.1-201ENST00000623590 212 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 AC127502.3-201ENST00000636170 1206 ntBASIC3.46□□□□□ -1.86
PRPF39Q86UA1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 RNY4P24-201ENST00000362735 96 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 RNU6-805P-201ENST00000365643 106 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 RNU6-278P-201ENST00000390945 109 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC110754.1-201ENST00000399740 601 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 CCNG1P1-201ENST00000406783 885 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL356968.1-201ENST00000416622 474 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 SPA17P1-201ENST00000416656 452 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 HSPE1P1-201ENST00000421494 318 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 RPL21P40-201ENST00000428586 483 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 FTH1P1-201ENST00000437933 532 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 ELOCP30-201ENST00000447108 299 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 SNRPGP6-201ENST00000451124 220 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC097262.1-201ENST00000452559 548 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 RNU7-59P-201ENST00000459101 61 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC008481.1-201ENST00000463278 396 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC093663.1-201ENST00000497190 394 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 FCF1P8-201ENST00000510322 597 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 OR5BM1P-201ENST00000512021 366 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 Y_RNA.717-201ENST00000517106 92 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 RNA5SP291-201ENST00000517222 105 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 RN7SKP57-201ENST00000517248 293 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AP000867.2-201ENST00000532468 320 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 MIR4307-201ENST00000582802 84 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC103710.1-201ENST00000610003 901 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC091304.6-201ENST00000619761 202 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AL356266.1-201ENST00000623311 483 ntBASIC3.45□□□□□ -1.86
PRPF39Q86UA1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF39Q86UA1 AC007496.3-201ENST00000624987 3443 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms