Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.95□□□□□ -1.62
SF3A1Q15459 MTCYBP8-201ENST00000422855 651 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.95□□□□□ -1.62
SF3A1Q15459 RPL23AP1-201ENST00000428990 471 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 MTND1P2-201ENST00000430604 821 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 ATP5JP1-201ENST00000431631 322 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 AL591212.2-201ENST00000433923 257 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 CBWD4P-201ENST00000445695 655 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 MTAPP1-201ENST00000489154 819 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 RNU6-123P-201ENST00000516163 102 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 IFITM8P-201ENST00000522529 394 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 RANP3-201ENST00000530970 276 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 AC004024.1-201ENST00000549244 247 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 MIR4775-201ENST00000581168 75 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.95□□□□□ -1.62
SF3A1Q15459 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.95□□□□□ -1.62
SF3A1Q15459 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 AL354984.3-201ENST00000604803 325 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 AC012409.4-201ENST00000612923 249 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 AL021997.2-201ENST00000615674 271 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.95□□□□□ -1.62
SF3A1Q15459 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SF3A1Q15459 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.95□□□□□ -1.62
SF3A1Q15459 MFSD8-216ENST00000641147 4009 ntBASIC4.95□□□□□ -1.62
SF3A1Q15459 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SF3A1Q15459 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SF3A1Q15459 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SF3A1Q15459 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SF3A1Q15459 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 AC006020.1-201ENST00000420179 1854 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.94□□□□□ -1.62
SF3A1Q15459 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.94□□□□□ -1.62
SF3A1Q15459 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SF3A1Q15459 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 MIR331-201ENST00000362302 94 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 Y_RNA.89-201ENST00000363031 102 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 Y_RNA.576-201ENST00000384781 102 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AL583835.1-201ENST00000399570 407 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AC092809.3-201ENST00000415453 231 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.94□□□□□ -1.62
SF3A1Q15459 AC245054.1-201ENST00000420944 258 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.94□□□□□ -1.62
SF3A1Q15459 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.94□□□□□ -1.62
SF3A1Q15459 PRDX3P3-201ENST00000447765 522 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 NFU1P2-201ENST00000448700 469 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 CACYBPP2-201ENST00000453625 678 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SF3A1Q15459 AC068587.1-201ENST00000483613 781 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 FAM92A1P2-202ENST00000504766 877 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 HMGB3P15-201ENST00000507326 574 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AC104806.1-201ENST00000508720 308 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 TTC39CP1-201ENST00000512513 755 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AC105417.1-201ENST00000514691 285 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 Y_RNA.689-201ENST00000516589 107 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.94□□□□□ -1.62
SF3A1Q15459 ADI1P3-201ENST00000549509 470 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.94□□□□□ -1.62
SF3A1Q15459 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.94□□□□□ -1.62
SF3A1Q15459 MIR4284-201ENST00000578924 81 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 AC130324.3-201ENST00000614165 542 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 AC090132.2-201ENST00000615881 347 ntBASIC4.94□□□□□ -1.62
SF3A1Q15459 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.94□□□□□ -1.62
SF3A1Q15459 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.94□□□□□ -1.62
SF3A1Q15459 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SF3A1Q15459 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.94□□□□□ -1.62
SF3A1Q15459 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SF3A1Q15459 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SF3A1Q15459 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SF3A1Q15459 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
SF3A1Q15459 OR5P1P-201ENST00000299512 925 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 Y_RNA.255-201ENST00000364581 97 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 RNA5SP513-201ENST00000364648 118 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.93□□□□□ -1.62
SF3A1Q15459 MIR129-1-201ENST00000384972 72 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 PPIAP31-201ENST00000405422 495 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 RNU6-387P-201ENST00000411331 105 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 BX842559.1-201ENST00000419615 532 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 GTF2IP20-201ENST00000431663 360 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.93□□□□□ -1.62
SF3A1Q15459 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.93□□□□□ -1.62
SF3A1Q15459 AC010469.1-201ENST00000463864 576 ntBASIC4.93□□□□□ -1.62
SF3A1Q15459 AL163973.1-201ENST00000484753 577 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms