Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.89□□□□□ -2.27
HSPG2P98160 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.89□□□□□ -2.27
HSPG2P98160 ZNF192P1-203ENST00000565888 810 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 KATNBL1P1-201ENST00000605192 748 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AC018754.1-201ENST00000607486 925 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 AC104307.1-201ENST00000616142 196 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 MIR203B-201ENST00000636080 86 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
HSPG2P98160 AL136164.4-201ENST00000625013 2135 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 AC090453.1-201ENST00000495560 436 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.89□□□□□ -2.27
HSPG2P98160 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.89□□□□□ -2.27
HSPG2P98160 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC0.89□□□□□ -2.27
HSPG2P98160 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
HSPG2P98160 SNRPEP2-201ENST00000397592 279 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 SUMO1P4-201ENST00000429430 302 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AC090515.1-201ENST00000465295 476 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC0.89□□□□□ -2.27
HSPG2P98160 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.89□□□□□ -2.27
HSPG2P98160 RNA5SP121-201ENST00000516537 101 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 SULT1C2P1-202ENST00000562418 459 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC0.89□□□□□ -2.27
HSPG2P98160 AL445493.3-201ENST00000619568 477 ntBASIC0.89□□□□□ -2.27
HSPG2P98160 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HSPG2P98160 RNU6-603P-201ENST00000411403 107 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 SEC63P1-201ENST00000425785 1258 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 XKRYP6-201ENST00000440468 1116 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HSPG2P98160 XKRYP3-201ENST00000442113 1116 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.88□□□□□ -2.27
HSPG2P98160 AC108059.3-201ENST00000456388 214 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC0.88□□□□□ -2.27
HSPG2P98160 AP004242.1-201ENST00000533701 349 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
HSPG2P98160 MIR6078-201ENST00000611069 100 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC0.88□□□□□ -2.27
HSPG2P98160 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HSPG2P98160 RNU4-91P-201ENST00000364778 135 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HSPG2P98160 SNORA70.7-201ENST00000384159 133 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC0.88□□□□□ -2.27
HSPG2P98160 CYCSP33-201ENST00000414485 327 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.88□□□□□ -2.27
HSPG2P98160 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.88□□□□□ -2.27
HSPG2P98160 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
HSPG2P98160 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
HSPG2P98160 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.88□□□□□ -2.27
HSPG2P98160 AC009965.2-201ENST00000425328 970 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 AC005534.2-201ENST00000431047 433 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 MTCYBP45-201ENST00000435243 565 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 AC012181.1-201ENST00000479895 423 ntBASIC0.88□□□□□ -2.27
HSPG2P98160 Y_RNA.258-201ENST00000364613 105 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 RNU1-133P-201ENST00000364867 167 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 MIR124-3-201ENST00000384866 87 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 EZH2P1-201ENST00000431167 291 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.87□□□□□ -2.27
HSPG2P98160 RNU6-113P-201ENST00000516653 101 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 SETP2-201ENST00000553886 926 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 YWHAQP7-201ENST00000603536 658 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 RPL23AP88-201ENST00000605759 454 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.87□□□□□ -2.27
HSPG2P98160 PABPC1P9-201ENST00000426076 1612 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 U3.15-201ENST00000365398 212 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.87□□□□□ -2.27
HSPG2P98160 TPT1P14-201ENST00000448018 505 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC092451.1-201ENST00000480211 153 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.87□□□□□ -2.27
HSPG2P98160 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.87□□□□□ -2.27
HSPG2P98160 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.87□□□□□ -2.27
HSPG2P98160 AC092954.1-201ENST00000609121 445 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC083806.3-201ENST00000614016 455 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AL449363.1-201ENST00000617815 186 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AP000676.4-201ENST00000624659 623 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 SGO1P2-201ENST00000429458 1589 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 MTND5P25-201ENST00000430499 799 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AP002345.1-201ENST00000456493 928 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 RNU6-1132P-201ENST00000459214 107 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 RN7SKP265-201ENST00000516448 223 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC121758.2-201ENST00000553271 193 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC011890.2-201ENST00000613393 294 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC048347.1-201ENST00000624621 427 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HSPG2P98160 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.87□□□□□ -2.27
HSPG2P98160 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AP000873.1-201ENST00000463987 400 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC0.87□□□□□ -2.27
HSPG2P98160 AL158801.5-201ENST00000623123 465 ntBASIC0.87□□□□□ -2.27
HSPG2P98160 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.87□□□□□ -2.27
HSPG2P98160 RLIMP2-201ENST00000427891 1563 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 MIRLET7G-201ENST00000362280 84 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC0.86□□□□□ -2.27
HSPG2P98160 RNU6-1320P-201ENST00000390838 107 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms