Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RPS24P6-201ENST00000452670 400 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 AL109741.2-201ENST00000455561 343 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 KLHL2P1-201ENST00000508691 521 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.12□□□□□ -1.91
RIPK4P57078 RN7SKP244-201ENST00000516513 307 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 RNA5SP402-201ENST00000517148 110 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 MRPS36P3-201ENST00000519284 130 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.12□□□□□ -1.91
RIPK4P57078 AP004371.1-201ENST00000525240 214 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK4P57078 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK4P57078 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.12□□□□□ -1.91
RIPK4P57078 AC012182.1-201ENST00000570133 895 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 MTND3P19-201ENST00000603825 345 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 AC067747.1-201ENST00000608026 250 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 PART1_2.1-201ENST00000612397 250 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 AL158163.2-201ENST00000619110 700 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 AC123767.1-202ENST00000620407 817 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 AC011330.2-201ENST00000621680 635 ntBASIC3.12□□□□□ -1.91
RIPK4P57078 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RIPK4P57078 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RIPK4P57078 AC006020.1-201ENST00000420179 1854 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RIPK4P57078 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
RIPK4P57078 AC004925.1-201ENST00000624256 2706 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 RNU6-1066P-201ENST00000363573 105 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 SNORA51.6-201ENST00000384151 125 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AL445529.1-201ENST00000398713 389 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 LUZP4P1-201ENST00000415420 344 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 XKRYP1-201ENST00000423438 492 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 XKRYP2-201ENST00000432915 492 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.11□□□□□ -1.91
RIPK4P57078 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.11□□□□□ -1.91
RIPK4P57078 AC010301.1-201ENST00000473936 355 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.11□□□□□ -1.91
RIPK4P57078 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.11□□□□□ -1.91
RIPK4P57078 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.11□□□□□ -1.91
RIPK4P57078 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.11□□□□□ -1.91
RIPK4P57078 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.11□□□□□ -1.91
RIPK4P57078 AC107952.2-201ENST00000606048 486 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC009237.15-201ENST00000610252 501 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC092106.3-201ENST00000611308 722 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC008083.4-201ENST00000615076 444 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.11□□□□□ -1.91
RIPK4P57078 AC010975.3-201ENST00000618727 978 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AL121895.2-201ENST00000619558 447 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC009318.4-201ENST00000620496 486 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC022079.1-201ENST00000621546 602 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC019226.2-201ENST00000625973 424 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 AC010149.2-201ENST00000637608 315 ntBASIC3.11□□□□□ -1.91
RIPK4P57078 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RIPK4P57078 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RIPK4P57078 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RIPK4P57078 AP001350.1-201ENST00000601906 1524 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 SNORD116-12-201ENST00000384468 92 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 RNU6-821P-201ENST00000390995 107 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AL024474.1-201ENST00000404655 591 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 FAT1P1-201ENST00000406588 507 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 RNU2-71P-201ENST00000411395 189 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.1□□□□□ -1.91
RIPK4P57078 MTND4P3-201ENST00000417829 541 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.1□□□□□ -1.91
RIPK4P57078 USP9YP24-201ENST00000434374 697 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.1□□□□□ -1.91
RIPK4P57078 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.1□□□□□ -1.91
RIPK4P57078 USP9YP17-201ENST00000444617 696 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 RPL7P36-201ENST00000444633 681 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.1□□□□□ -1.91
RIPK4P57078 MTCO1P48-201ENST00000448024 1096 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 ZNF886P-201ENST00000450781 723 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.1□□□□□ -1.91
RIPK4P57078 AC092155.2-201ENST00000454675 477 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 SNORD11.1-201ENST00000459482 85 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.1□□□□□ -1.91
RIPK4P57078 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.1□□□□□ -1.91
RIPK4P57078 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.1□□□□□ -1.91
RIPK4P57078 AC008413.1-201ENST00000511864 177 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 RNU6-311P-201ENST00000516224 102 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 SNORA48.10-201ENST00000516965 160 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.1□□□□□ -1.91
RIPK4P57078 DUXAP5-201ENST00000529668 529 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.1□□□□□ -1.91
RIPK4P57078 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.1□□□□□ -1.91
RIPK4P57078 MIR4446-201ENST00000578505 67 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AC015688.2-201ENST00000584523 262 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AC091946.2-201ENST00000606105 291 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AC048344.4-201ENST00000619744 527 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RIPK4P57078 AC120349.3-201ENST00000624377 529 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 AP000676.4-201ENST00000624659 623 ntBASIC3.1□□□□□ -1.91
RIPK4P57078 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.1□□□□□ -1.91
RIPK4P57078 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.1□□□□□ -1.91
RIPK4P57078 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.1□□□□□ -1.91
RIPK4P57078 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.1□□□□□ -1.91
RIPK4P57078 RNU6-492P-201ENST00000363035 104 ntBASIC3.09□□□□□ -1.91
RIPK4P57078 RNU6-263P-201ENST00000363811 107 ntBASIC3.09□□□□□ -1.91
RIPK4P57078 MIR506-201ENST00000384998 124 ntBASIC3.09□□□□□ -1.91
RIPK4P57078 RNU6-1300P-201ENST00000391046 108 ntBASIC3.09□□□□□ -1.91
RIPK4P57078 RN7SKP140-201ENST00000411196 284 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms