Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.58□□□□□ -2
SMARCA4P51532 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMARCA4P51532 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.58□□□□□ -2
SMARCA4P51532 RNU6-386P-201ENST00000362650 107 ntBASIC2.58□□□□□ -2
SMARCA4P51532 DEFB109C-201ENST00000382575 264 ntBASIC2.58□□□□□ -2
SMARCA4P51532 DEFB109B-201ENST00000382656 264 ntBASIC2.58□□□□□ -2
SMARCA4P51532 MTND1P23-201ENST00000416931 372 ntBASIC2.58□□□□□ -2
SMARCA4P51532 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.58□□□□□ -2
SMARCA4P51532 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.58□□□□□ -2
SMARCA4P51532 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.58□□□□□ -2
SMARCA4P51532 RNU7-27P-201ENST00000459281 62 ntBASIC2.58□□□□□ -2
SMARCA4P51532 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.58□□□□□ -2
SMARCA4P51532 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.58□□□□□ -2
SMARCA4P51532 AC034222.1-201ENST00000494052 532 ntBASIC2.58□□□□□ -2
SMARCA4P51532 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.58□□□□□ -2
SMARCA4P51532 AC010627.1-201ENST00000503819 1294 ntBASIC2.58□□□□□ -2
SMARCA4P51532 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
SMARCA4P51532 AC025857.1-201ENST00000525252 377 ntBASIC2.58□□□□□ -2
SMARCA4P51532 AC016957.1-201ENST00000534895 309 ntBASIC2.58□□□□□ -2
SMARCA4P51532 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.58□□□□□ -2
SMARCA4P51532 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.58□□□□□ -2
SMARCA4P51532 MIR4716-201ENST00000579628 84 ntBASIC2.58□□□□□ -2
SMARCA4P51532 AL158801.5-201ENST00000623123 465 ntBASIC2.58□□□□□ -2
SMARCA4P51532 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.58□□□□□ -2
SMARCA4P51532 ICE2P2-201ENST00000483823 2787 ntBASIC2.58□□□□□ -2
SMARCA4P51532 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.57□□□□□ -2
SMARCA4P51532 RNU1-101P-201ENST00000391171 127 ntBASIC2.57□□□□□ -2
SMARCA4P51532 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.57□□□□□ -2
SMARCA4P51532 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.57□□□□□ -2
SMARCA4P51532 XKRYP6-201ENST00000440468 1116 ntBASIC2.57□□□□□ -2
SMARCA4P51532 XKRYP3-201ENST00000442113 1116 ntBASIC2.57□□□□□ -2
SMARCA4P51532 AC004223.1-201ENST00000479840 271 ntBASIC2.57□□□□□ -2
SMARCA4P51532 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.57□□□□□ -2
SMARCA4P51532 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA4P51532 AL137100.2-201ENST00000555786 315 ntBASIC2.57□□□□□ -2
SMARCA4P51532 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA4P51532 FAM60CP-201ENST00000591086 664 ntBASIC2.57□□□□□ -2
SMARCA4P51532 AC080078.3-201ENST00000605407 463 ntBASIC2.57□□□□□ -2
SMARCA4P51532 SNHG22-203ENST00000617833 660 ntBASIC2.57□□□□□ -2
SMARCA4P51532 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCA4P51532 AC068700.1-201ENST00000565862 3754 ntBASIC2.57□□□□□ -2
SMARCA4P51532 RNA5SP492-201ENST00000411330 114 ntBASIC2.57□□□□□ -2
SMARCA4P51532 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.57□□□□□ -2
SMARCA4P51532 AC010683.1-201ENST00000473673 378 ntBASIC2.57□□□□□ -2
SMARCA4P51532 MTCYBP18-201ENST00000501056 747 ntBASIC2.57□□□□□ -2
SMARCA4P51532 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA4P51532 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.57□□□□□ -2
SMARCA4P51532 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA4P51532 AC115989.2-201ENST00000578640 563 ntBASIC2.57□□□□□ -2
SMARCA4P51532 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA4P51532 AC091057.2-201ENST00000602594 792 ntBASIC2.57□□□□□ -2
SMARCA4P51532 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.57□□□□□ -2
SMARCA4P51532 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.57□□□□□ -2
SMARCA4P51532 uc_338.9-201ENST00000617424 182 ntBASIC2.57□□□□□ -2
SMARCA4P51532 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCA4P51532 SNORA31-201ENST00000362607 130 ntBASIC2.56□□□□□ -2
SMARCA4P51532 RNU6-666P-201ENST00000363499 107 ntBASIC2.56□□□□□ -2
SMARCA4P51532 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SMARCA4P51532 Z85995.1-201ENST00000415547 335 ntBASIC2.56□□□□□ -2
SMARCA4P51532 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.56□□□□□ -2
SMARCA4P51532 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
SMARCA4P51532 RPS29P20-201ENST00000489592 171 ntBASIC2.56□□□□□ -2
SMARCA4P51532 AL355816.1-201ENST00000607951 118 ntBASIC2.56□□□□□ -2
SMARCA4P51532 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SMARCA4P51532 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.56□□□□□ -2
SMARCA4P51532 AC123912.3-201ENST00000600907 1367 ntBASIC2.55□□□□□ -2
SMARCA4P51532 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SMARCA4P51532 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.55□□□□□ -2
SMARCA4P51532 RPL31P52-201ENST00000407532 367 ntBASIC2.55□□□□□ -2
SMARCA4P51532 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.55□□□□□ -2
SMARCA4P51532 C1DP3-201ENST00000455013 423 ntBASIC2.55□□□□□ -2
SMARCA4P51532 AC023050.1-201ENST00000498198 304 ntBASIC2.55□□□□□ -2
SMARCA4P51532 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.55□□□□□ -2
SMARCA4P51532 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.55□□□□□ -2
SMARCA4P51532 Y_RNA.295-201ENST00000364918 102 ntBASIC2.54□□□□□ -2
SMARCA4P51532 RNA5SP498-201ENST00000411342 120 ntBASIC2.54□□□□□ -2
SMARCA4P51532 HSPE1P1-201ENST00000421494 318 ntBASIC2.54□□□□□ -2
SMARCA4P51532 HMGN2P19-201ENST00000425149 265 ntBASIC2.54□□□□□ -2
SMARCA4P51532 AC005912.1-201ENST00000495392 255 ntBASIC2.54□□□□□ -2
SMARCA4P51532 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.54□□□□□ -2
SMARCA4P51532 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMARCA4P51532 AL596028.1-201ENST00000326971 197 ntBASIC2.53□□□□□ -2
SMARCA4P51532 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMARCA4P51532 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMARCA4P51532 MTCYBP12-201ENST00000440559 1134 ntBASIC2.53□□□□□ -2
SMARCA4P51532 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.53□□□□□ -2
SMARCA4P51532 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.53□□□□□ -2
SMARCA4P51532 AC021087.2-201ENST00000504656 1203 ntBASIC2.53□□□□□ -2
SMARCA4P51532 BNIP3P4-201ENST00000604946 565 ntBASIC2.53□□□□□ -2
SMARCA4P51532 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.53□□□□□ -2
SMARCA4P51532 MIR7973-1-201ENST00000614683 76 ntBASIC2.53□□□□□ -2
SMARCA4P51532 AC103710.2-202ENST00000641454 2853 ntBASIC2.53□□□□□ -2
SMARCA4P51532 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SMARCA4P51532 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMARCA4P51532 RNU6-317P-201ENST00000384031 107 ntBASIC2.53□□□□□ -2
SMARCA4P51532 RPL23AP47-201ENST00000408017 460 ntBASIC2.53□□□□□ -2
SMARCA4P51532 RFESDP1-201ENST00000422350 461 ntBASIC2.53□□□□□ -2
SMARCA4P51532 RPS6P15-201ENST00000431996 751 ntBASIC2.53□□□□□ -2
SMARCA4P51532 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.53□□□□□ -2
SMARCA4P51532 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms