Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 MIR2114-201ENST00000516645 80 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 RNU6-711P-201ENST00000517255 106 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 MTATP6P15-201ENST00000527233 835 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC125611.2-201ENST00000551907 647 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 GTF3AP2-201ENST00000557014 266 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC141257.3-201ENST00000572906 215 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC011260.1-201ENST00000578420 472 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AP000254.1-201ENST00000609934 520 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AL139418.1-201ENST00000613613 177 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TNFRSF4P43489 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC079416.3-201ENST00000624479 549 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC008568.2-201ENST00000623862 2313 ntBASIC3.05□□□□□ -1.92
TNFRSF4P43489 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFRSF4P43489 AC009487.2-201ENST00000420969 6821 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TNFRSF4P43489 RNU6-777P-201ENST00000364265 104 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 SNORA1.3-201ENST00000384676 136 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 RNU6-1077P-201ENST00000410506 102 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 RNA5SP31-201ENST00000411144 127 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 RAP1BP1-201ENST00000412709 553 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 RPL7P34-201ENST00000433316 712 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC090774.1-201ENST00000435925 246 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 TXNP1-201ENST00000441872 371 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL135938.1-201ENST00000443141 297 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC112653.1-201ENST00000443851 386 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 MTND1P9-201ENST00000453775 944 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL109741.2-201ENST00000455561 343 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC010401.1-201ENST00000463867 348 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL049714.1-201ENST00000466686 347 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 RPL31P60-201ENST00000478450 367 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 RPL30P14-201ENST00000482744 348 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC091826.1-201ENST00000514065 313 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 RNA5SP356-201ENST00000515972 94 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 MTND2P38-201ENST00000522536 667 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL357094.1-201ENST00000603845 844 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC004067.1-201ENST00000608733 700 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL607023.1-201ENST00000620045 248 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC009039.2-201ENST00000624524 529 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL159972.1-201ENST00000625150 448 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC019226.2-201ENST00000625973 424 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TNFRSF4P43489 AC087359.1-201ENST00000508335 1740 ntBASIC3.04□□□□□ -1.92
TNFRSF4P43489 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFRSF4P43489 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AP000526.1-201ENST00000603308 1388 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFRSF4P43489 RNU1-75P-201ENST00000347264 129 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 RPL30P2-201ENST00000414021 291 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 VPS26BP1-201ENST00000417155 755 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 NDUFB4P6-201ENST00000436819 366 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 UBE2V1P13-201ENST00000436983 439 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AL590664.1-201ENST00000448065 339 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC104308.1-201ENST00000454621 333 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AL359385.1-201ENST00000456509 365 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 ATG12P2-201ENST00000456830 416 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC093809.1-201ENST00000509155 340 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 RNA5SP217-201ENST00000515959 91 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AP003497.1-201ENST00000528472 562 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TNFRSF4P43489 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 ELOCP32-201ENST00000548625 324 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFRSF4P43489 AC034268.2-201ENST00000571784 482 ntBASIC3.03□□□□□ -1.92
TNFRSF4P43489 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFRSF4P43489 MIR4672-201ENST00000583126 81 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 736.5 ms