Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL512643.1-201ENST00000635735 524 ntBASIC4.12□□□□□ -1.75
CD40P25942 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.12□□□□□ -1.75
CD40P25942 ADAM5-202ENST00000399789 1942 ntBASIC4.12□□□□□ -1.75
CD40P25942 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.12□□□□□ -1.75
CD40P25942 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
CD40P25942 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.12□□□□□ -1.75
CD40P25942 AP001273.1-201ENST00000624493 3152 ntBASIC4.12□□□□□ -1.75
CD40P25942 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD40P25942 MFSD8-216ENST00000641147 4009 ntBASIC4.11□□□□□ -1.75
CD40P25942 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD40P25942 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CD40P25942 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD40P25942 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.11□□□□□ -1.75
CD40P25942 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD40P25942 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CD40P25942 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CD40P25942 RNA5SP52-201ENST00000362448 134 ntBASIC4.11□□□□□ -1.75
CD40P25942 RNU6-1167P-201ENST00000363227 94 ntBASIC4.11□□□□□ -1.75
CD40P25942 Y_RNA.259-201ENST00000364619 101 ntBASIC4.11□□□□□ -1.75
CD40P25942 Y_RNA.339-201ENST00000365325 102 ntBASIC4.11□□□□□ -1.75
CD40P25942 AL445189.1-201ENST00000405722 338 ntBASIC4.11□□□□□ -1.75
CD40P25942 RN7SKP267-201ENST00000410381 285 ntBASIC4.11□□□□□ -1.75
CD40P25942 RNU4-14P-201ENST00000410858 122 ntBASIC4.11□□□□□ -1.75
CD40P25942 AL354751.2-201ENST00000415471 210 ntBASIC4.11□□□□□ -1.75
CD40P25942 AC063979.1-201ENST00000415539 377 ntBASIC4.11□□□□□ -1.75
CD40P25942 RPL21P90-201ENST00000415692 466 ntBASIC4.11□□□□□ -1.75
CD40P25942 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.11□□□□□ -1.75
CD40P25942 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.11□□□□□ -1.75
CD40P25942 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.11□□□□□ -1.75
CD40P25942 AF228730.2-201ENST00000438784 848 ntBASIC4.11□□□□□ -1.75
CD40P25942 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CD40P25942 SNORD19B-201ENST00000459623 84 ntBASIC4.11□□□□□ -1.75
CD40P25942 RPL5P30-201ENST00000465511 891 ntBASIC4.11□□□□□ -1.75
CD40P25942 AC087884.1-201ENST00000469738 328 ntBASIC4.11□□□□□ -1.75
CD40P25942 AC117503.1-201ENST00000472241 394 ntBASIC4.11□□□□□ -1.75
CD40P25942 RPS15AP34-201ENST00000487776 387 ntBASIC4.11□□□□□ -1.75
CD40P25942 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.11□□□□□ -1.75
CD40P25942 SUMO2P6-201ENST00000505273 288 ntBASIC4.11□□□□□ -1.75
CD40P25942 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.11□□□□□ -1.75
CD40P25942 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.11□□□□□ -1.75
CD40P25942 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.11□□□□□ -1.75
CD40P25942 RNA5SP454-201ENST00000517231 127 ntBASIC4.11□□□□□ -1.75
CD40P25942 AC090151.1-201ENST00000520784 730 ntBASIC4.11□□□□□ -1.75
CD40P25942 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.11□□□□□ -1.75
CD40P25942 COPS8P3-201ENST00000526024 482 ntBASIC4.11□□□□□ -1.75
CD40P25942 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.11□□□□□ -1.75
CD40P25942 AC005868.1-201ENST00000536421 331 ntBASIC4.11□□□□□ -1.75
CD40P25942 AC093249.4-201ENST00000564755 259 ntBASIC4.11□□□□□ -1.75
CD40P25942 AC138761.3-201ENST00000579993 334 ntBASIC4.11□□□□□ -1.75
CD40P25942 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.11□□□□□ -1.75
CD40P25942 AC107294.1-201ENST00000609524 467 ntBASIC4.11□□□□□ -1.75
CD40P25942 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
CD40P25942 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.11□□□□□ -1.75
CD40P25942 AL359757.2-201ENST00000624309 274 ntBASIC4.11□□□□□ -1.75
CD40P25942 OR52H1-202ENST00000641796 1061 ntBASIC4.11□□□□□ -1.75
CD40P25942 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.11□□□□□ -1.75
CD40P25942 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CD40P25942 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.11□□□□□ -1.75
CD40P25942 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CD40P25942 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CD40P25942 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD40P25942 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD40P25942 ZFRP1-201ENST00000457579 2970 ntBASIC4.1□□□□□ -1.75
CD40P25942 Y_RNA.212-201ENST00000364177 102 ntBASIC4.1□□□□□ -1.75
CD40P25942 RNU6-371P-201ENST00000364283 108 ntBASIC4.1□□□□□ -1.75
CD40P25942 RNU6-1303P-201ENST00000364841 107 ntBASIC4.1□□□□□ -1.75
CD40P25942 SNORA4.3-201ENST00000365564 137 ntBASIC4.1□□□□□ -1.75
CD40P25942 RNU6-1297P-201ENST00000384415 104 ntBASIC4.1□□□□□ -1.75
CD40P25942 MIR1302-11-201ENST00000408051 138 ntBASIC4.1□□□□□ -1.75
CD40P25942 MIR1302-9-201ENST00000408365 138 ntBASIC4.1□□□□□ -1.75
CD40P25942 MIR1302-10-201ENST00000408734 138 ntBASIC4.1□□□□□ -1.75
CD40P25942 FAR2P2-201ENST00000413041 594 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC074085.1-201ENST00000413598 418 ntBASIC4.1□□□□□ -1.75
CD40P25942 AL139396.1-201ENST00000421137 167 ntBASIC4.1□□□□□ -1.75
CD40P25942 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 AC104333.2-201ENST00000422630 192 ntBASIC4.1□□□□□ -1.75
CD40P25942 MTCO2P12-201ENST00000427426 682 ntBASIC4.1□□□□□ -1.75
CD40P25942 SAR1AP4-201ENST00000429225 591 ntBASIC4.1□□□□□ -1.75
CD40P25942 AL118496.2-201ENST00000448300 230 ntBASIC4.1□□□□□ -1.75
CD40P25942 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.1□□□□□ -1.75
CD40P25942 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.1□□□□□ -1.75
CD40P25942 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.1□□□□□ -1.75
CD40P25942 RPL31P60-201ENST00000478450 367 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC068587.1-201ENST00000483613 781 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 RPL39P5-202ENST00000512505 151 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 SNORA70.16-201ENST00000516390 95 ntBASIC4.1□□□□□ -1.75
CD40P25942 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 AP005597.4-201ENST00000526762 229 ntBASIC4.1□□□□□ -1.75
CD40P25942 AP005639.2-201ENST00000527592 928 ntBASIC4.1□□□□□ -1.75
CD40P25942 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.1□□□□□ -1.75
CD40P25942 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.1□□□□□ -1.75
CD40P25942 AL390726.5-202ENST00000564800 256 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms