Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 MIR4421-201ENST00000578133 69 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 YWHAQP7-201ENST00000603536 658 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC242628.1-201ENST00000606810 391 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC025016.1-201ENST00000616746 682 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 MTND4P31-201ENST00000425607 1343 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.08□□□□□ -2.08
COL5A3P25940 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.08□□□□□ -2.08
COL5A3P25940 Y_RNA.110-201ENST00000363220 99 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 SNORA40.4-201ENST00000390971 128 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 MCTS2P-201ENST00000394552 546 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 RNA5SP492-201ENST00000411330 114 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.08□□□□□ -2.08
COL5A3P25940 MORF4L1P7-201ENST00000426038 703 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 FO393419.3-201ENST00000428741 282 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.08□□□□□ -2.08
COL5A3P25940 UBE2V1P5-201ENST00000440070 405 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.08□□□□□ -2.08
COL5A3P25940 AL109741.2-201ENST00000455561 343 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC069528.1-202ENST00000482888 637 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 OR9N1P-202ENST00000494289 481 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC090071.1-201ENST00000507713 644 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC023158.1-201ENST00000561632 1025 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 KATNBL1P5-201ENST00000605015 517 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC005014.3-201ENST00000605985 190 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AC121761.2-201ENST00000617300 689 ntBASIC2.08□□□□□ -2.08
COL5A3P25940 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.08□□□□□ -2.08
COL5A3P25940 RNU6-185P-201ENST00000384421 107 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 HNRNPDP2-201ENST00000406475 478 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 RNU4-74P-201ENST00000411280 161 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 POLHP1-201ENST00000411806 470 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.07□□□□□ -2.08
COL5A3P25940 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.07□□□□□ -2.08
COL5A3P25940 RPL12P25-201ENST00000455592 494 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 AC011979.1-201ENST00000472300 483 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 RPL21P93-201ENST00000480465 489 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 AC233702.1-201ENST00000482905 502 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 AC093591.1-201ENST00000491435 481 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 NOP56P3-201ENST00000549457 385 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 AL136520.1-202ENST00000555494 763 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 AC013444.2-201ENST00000603317 787 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 AC006249.1-201ENST00000621223 471 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.07□□□□□ -2.08
COL5A3P25940 ZNF33CP-201ENST00000432492 2030 ntBASIC2.07□□□□□ -2.08
COL5A3P25940 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
COL5A3P25940 RNU1-109P-201ENST00000383960 147 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 RPL23AP47-201ENST00000408017 460 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A3P25940 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A3P25940 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A3P25940 RNU6-1102P-201ENST00000516149 96 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A3P25940 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.06□□□□□ -2.08
COL5A3P25940 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.06□□□□□ -2.08
COL5A3P25940 AP000790.1-201ENST00000528891 737 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 AC004923.2-201ENST00000529649 369 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 OR6C73P-201ENST00000546432 358 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 WISP1-OT1-201ENST00000602893 642 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL5A3P25940 MTND4P1-201ENST00000457501 1466 ntBASIC2.06□□□□□ -2.08
COL5A3P25940 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.05□□□□□ -2.08
COL5A3P25940 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL5A3P25940 TAF9BP2-201ENST00000400856 499 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.05□□□□□ -2.08
COL5A3P25940 UBE2V1P6-201ENST00000430840 422 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AL513321.1-201ENST00000441175 761 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 BNIP3P2-201ENST00000441221 577 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 MTND2P6-201ENST00000455337 1030 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AC010468.3-201ENST00000508225 458 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.05□□□□□ -2.08
COL5A3P25940 HAUS1P3-201ENST00000523909 662 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 CIR1P1-201ENST00000524055 1133 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AL161670.1-201ENST00000554348 137 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC007375.1-201ENST00000554513 578 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 AC008687.2-201ENST00000597865 520 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 SUMO2P14-201ENST00000604488 293 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AL121594.5-201ENST00000631724 573 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.05□□□□□ -2.08
COL5A3P25940 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 RNU6-356P-201ENST00000384140 107 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC009237.2-201ENST00000421358 284 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 WARS2P1-201ENST00000429678 537 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 ARL5AP2-201ENST00000444698 533 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AL353718.1-201ENST00000451028 517 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 MTND2P30-201ENST00000456663 382 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC092798.1-201ENST00000458542 409 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.05□□□□□ -2.08
COL5A3P25940 OR5H4P-201ENST00000510851 923 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC109471.1-201ENST00000511631 612 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 RNU6-467P-201ENST00000517027 110 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 RN7SKP234-201ENST00000517173 224 ntBASIC2.05□□□□□ -2.08
COL5A3P25940 AC103833.1-201ENST00000517442 172 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms