Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 VN1R78P-201ENST00000597393 564 ntBASIC2.38□□□□□ -2.03
USF1P22415 RPL23AP78-201ENST00000599928 470 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL022067.1-201ENST00000602426 454 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL390208.1-201ENST00000605885 644 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC107294.1-201ENST00000609524 467 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC009237.15-201ENST00000610252 501 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC024257.5-201ENST00000612739 531 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC006213.4-201ENST00000616184 634 ntBASIC2.38□□□□□ -2.03
USF1P22415 SNHG22-203ENST00000617833 660 ntBASIC2.38□□□□□ -2.03
USF1P22415 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 MIR6733-201ENST00000635723 61 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.38□□□□□ -2.03
USF1P22415 AL359693.1-201ENST00000614959 2407 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL161431.1-201ENST00000618966 4205 ntBASIC2.37□□□□□ -2.03
USF1P22415 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
USF1P22415 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USF1P22415 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
USF1P22415 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USF1P22415 AL672167.1-206ENST00000356293 943 ntBASIC2.37□□□□□ -2.03
USF1P22415 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USF1P22415 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
USF1P22415 RNU6-198P-201ENST00000384258 104 ntBASIC2.37□□□□□ -2.03
USF1P22415 RNU6-1257P-201ENST00000384625 110 ntBASIC2.37□□□□□ -2.03
USF1P22415 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.37□□□□□ -2.03
USF1P22415 RNA5SP508-201ENST00000411327 119 ntBASIC2.37□□□□□ -2.03
USF1P22415 AL451074.5-201ENST00000415894 435 ntBASIC2.37□□□□□ -2.03
USF1P22415 TAAR7P-201ENST00000436141 242 ntBASIC2.37□□□□□ -2.03
USF1P22415 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.37□□□□□ -2.03
USF1P22415 EEF1B2P7-201ENST00000451177 676 ntBASIC2.37□□□□□ -2.03
USF1P22415 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.37□□□□□ -2.03
USF1P22415 GSTA11P-201ENST00000452866 669 ntBASIC2.37□□□□□ -2.03
USF1P22415 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.37□□□□□ -2.03
USF1P22415 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.37□□□□□ -2.03
USF1P22415 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.37□□□□□ -2.03
USF1P22415 AC147055.4-201ENST00000504399 745 ntBASIC2.37□□□□□ -2.03
USF1P22415 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.37□□□□□ -2.03
USF1P22415 SNORA31.21-201ENST00000517180 77 ntBASIC2.37□□□□□ -2.03
USF1P22415 SNORA31.22-201ENST00000517204 135 ntBASIC2.37□□□□□ -2.03
USF1P22415 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.37□□□□□ -2.03
USF1P22415 AMZ2P1-203ENST00000565833 850 ntBASIC2.37□□□□□ -2.03
USF1P22415 AC023043.3-201ENST00000593113 385 ntBASIC2.37□□□□□ -2.03
USF1P22415 AP001429.1-201ENST00000602568 530 ntBASIC2.37□□□□□ -2.03
USF1P22415 AC011451.2-201ENST00000604303 598 ntBASIC2.37□□□□□ -2.03
USF1P22415 AC090132.2-201ENST00000615881 347 ntBASIC2.37□□□□□ -2.03
USF1P22415 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.37□□□□□ -2.03
USF1P22415 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.37□□□□□ -2.03
USF1P22415 AC110079.1-202ENST00000635213 138 ntBASIC2.37□□□□□ -2.03
USF1P22415 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.37□□□□□ -2.03
USF1P22415 AC010149.2-201ENST00000637608 315 ntBASIC2.37□□□□□ -2.03
USF1P22415 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USF1P22415 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.37□□□□□ -2.03
USF1P22415 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.36□□□□□ -2.03
USF1P22415 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USF1P22415 AL360182.1-201ENST00000397433 468 ntBASIC2.36□□□□□ -2.03
USF1P22415 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USF1P22415 AC129850.1-201ENST00000436203 508 ntBASIC2.36□□□□□ -2.03
USF1P22415 FTH1P25-201ENST00000447665 469 ntBASIC2.36□□□□□ -2.03
USF1P22415 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.36□□□□□ -2.03
USF1P22415 snoU13.28-201ENST00000459235 104 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC079203.1-201ENST00000487972 404 ntBASIC2.36□□□□□ -2.03
USF1P22415 SUMO2P5-201ENST00000506790 245 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC117522.3-201ENST00000507974 584 ntBASIC2.36□□□□□ -2.03
USF1P22415 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC034159.1-201ENST00000513885 583 ntBASIC2.36□□□□□ -2.03
USF1P22415 RNU6-583P-201ENST00000516012 92 ntBASIC2.36□□□□□ -2.03
USF1P22415 RNU6-528P-201ENST00000516926 100 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC087373.1-201ENST00000524920 491 ntBASIC2.36□□□□□ -2.03
USF1P22415 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.36□□□□□ -2.03
USF1P22415 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.36□□□□□ -2.03
USF1P22415 AC104072.1-201ENST00000568817 668 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC008739.2-201ENST00000597006 317 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC112220.2-201ENST00000605513 533 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC024060.1-201ENST00000607052 494 ntBASIC2.36□□□□□ -2.03
USF1P22415 AL590099.1-201ENST00000615276 138 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC068880.5-201ENST00000624331 290 ntBASIC2.36□□□□□ -2.03
USF1P22415 OR1S1-201ENST00000624470 978 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC138915.1-201ENST00000565427 1685 ntBASIC2.36□□□□□ -2.03
USF1P22415 MTCO1P9-201ENST00000505577 1534 ntBASIC2.36□□□□□ -2.03
USF1P22415 AC109315.1-201ENST00000584143 1347 ntBASIC2.36□□□□□ -2.03
USF1P22415 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.36□□□□□ -2.03
USF1P22415 AC008669.1-201ENST00000565823 2178 ntBASIC2.36□□□□□ -2.03
USF1P22415 AP000526.1-201ENST00000603308 1388 ntBASIC2.36□□□□□ -2.03
USF1P22415 SDAD1P2-201ENST00000441308 2028 ntBASIC2.35□□□□□ -2.03
USF1P22415 RNU6-859P-201ENST00000362728 107 ntBASIC2.35□□□□□ -2.03
USF1P22415 RNU1-35P-201ENST00000362782 153 ntBASIC2.35□□□□□ -2.03
USF1P22415 RNU4-51P-201ENST00000364206 140 ntBASIC2.35□□□□□ -2.03
USF1P22415 SNORD21-201ENST00000383953 95 ntBASIC2.35□□□□□ -2.03
USF1P22415 MIR9-1-201ENST00000385198 89 ntBASIC2.35□□□□□ -2.03
USF1P22415 AL356057.2-201ENST00000403318 432 ntBASIC2.35□□□□□ -2.03
USF1P22415 AL139095.1-201ENST00000404326 391 ntBASIC2.35□□□□□ -2.03
USF1P22415 RNU2-52P-201ENST00000410680 190 ntBASIC2.35□□□□□ -2.03
USF1P22415 RPL7P8-201ENST00000411964 730 ntBASIC2.35□□□□□ -2.03
USF1P22415 Z75741.2-201ENST00000417272 1167 ntBASIC2.35□□□□□ -2.03
USF1P22415 RPL7L1P10-201ENST00000427790 463 ntBASIC2.35□□□□□ -2.03
USF1P22415 AL035407.1-201ENST00000429211 571 ntBASIC2.35□□□□□ -2.03
USF1P22415 ARL5AP4-201ENST00000430731 512 ntBASIC2.35□□□□□ -2.03
USF1P22415 AP000949.1-201ENST00000438328 629 ntBASIC2.35□□□□□ -2.03
USF1P22415 ARPC3P5-201ENST00000448802 534 ntBASIC2.35□□□□□ -2.03
USF1P22415 RPL37P4-201ENST00000448908 268 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms