Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC024940.5-201ENST00000622889 474 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AL158801.5-201ENST00000623123 465 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 CR381572.1-201ENST00000625098 102 ntBASIC4.36□□□□□ -1.71
HLA-DOAP06340 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DOAP06340 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DOAP06340 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 RNA5SP72-201ENST00000364442 117 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 SNORD81.2-201ENST00000365153 76 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 SNORA69-201ENST00000383895 132 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 Y_RNA.394-201ENST00000383942 103 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 Y_RNA.481-201ENST00000384373 102 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 RNU6-878P-201ENST00000384578 110 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 MIR183-201ENST00000384958 110 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 MIR1-2-201ENST00000384961 85 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 SNORA11.1-201ENST00000408133 129 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 RNA5SP306-201ENST00000411087 107 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC127526.1-201ENST00000417526 366 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 RPS15AP12-201ENST00000419498 388 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC012065.2-201ENST00000421295 375 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 PRDX3P3-201ENST00000447765 522 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC010655.1-201ENST00000449336 292 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC002553.2-201ENST00000453217 340 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AP001992.1-205ENST00000462248 379 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC083798.1-201ENST00000472671 131 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 TRBV12-2-201ENST00000489763 344 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 Y_RNA.701-201ENST00000516812 110 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC008011.1-201ENST00000545989 227 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC125611.2-201ENST00000551907 647 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 AL353997.4-201ENST00000586196 166 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AC115621.1-201ENST00000604653 858 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 AL357559.1-201ENST00000622228 274 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 MTND1P37-201ENST00000636562 264 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 AL157700.1-201ENST00000561973 1432 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DOAP06340 MTND5P33-201ENST00000571250 1450 ntBASIC4.35□□□□□ -1.71
HLA-DOAP06340 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DOAP06340 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC090337.1-201ENST00000579651 2074 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC093535.2-201ENST00000624769 2326 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AL161781.1-201ENST00000354277 403 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 SNORD9-201ENST00000362566 104 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 Y_RNA.58-201ENST00000362807 102 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 Y_RNA.154-201ENST00000363624 102 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 RNY3P1-201ENST00000365085 102 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 RNY3-201ENST00000365484 102 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 RHOT1P2-201ENST00000366423 333 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 RNU6-767P-201ENST00000384132 107 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 RNU6-1207P-201ENST00000384343 107 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 Y_RNA.490-201ENST00000384413 102 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 MIR34B-201ENST00000385076 84 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DOAP06340 RNA5SP296-201ENST00000410523 111 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC007390.1-201ENST00000415722 356 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 MTCO3P12-201ENST00000416718 547 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 MRPL50P2-201ENST00000416821 482 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 SNRPEP10-201ENST00000420249 274 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 CYCSP4-201ENST00000429682 331 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC073063.1-201ENST00000434352 607 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 RPL7P52-201ENST00000449200 742 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 CYCSP35-201ENST00000451978 304 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 RPS20P24-201ENST00000457473 361 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC233702.1-201ENST00000482905 502 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC010486.1-201ENST00000511793 424 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 RN7SKP13-201ENST00000515933 244 ntBASIC4.34□□□□□ -1.71
HLA-DOAP06340 AC090572.1-201ENST00000519251 160 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms