Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 U2.12-201ENST00000613778 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.20-201ENST00000613956 192 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.9-201ENST00000615427 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.11-201ENST00000616345 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.2-201ENST00000616535 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 AL136981.2-201ENST00000617319 734 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.3-201ENST00000617785 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.19-201ENST00000618602 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 RNU2-1-201ENST00000618664 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.6-201ENST00000619225 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.5-201ENST00000619465 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 U2.10-201ENST00000620268 191 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 AC132825.7-201ENST00000638744 335 ntBASIC2.06□□□□□ -2.08
HLA-DQB2P05538 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DQB2P05538 AC009812.4-201ENST00000569134 1805 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 RNU6-251P-201ENST00000363235 104 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 SET-203ENST00000372688 801 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 RNU6-882P-201ENST00000391025 103 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 RN7SKP192-201ENST00000411291 327 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 Z82190.1-201ENST00000454534 490 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 TRBV12-1-201ENST00000479785 344 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 RPL21P47-201ENST00000483696 477 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC106872.3-201ENST00000495104 446 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 HMGB3P3-201ENST00000510526 400 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 SULT1C2P1-202ENST00000562418 459 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 OR4K7P-201ENST00000580232 945 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AL121917.1-203ENST00000605534 577 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AP002826.1-201ENST00000608835 315 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AC034102.8-201ENST00000615146 484 ntBASIC2.05□□□□□ -2.08
HLA-DQB2P05538 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HLA-DQB2P05538 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 U8.2-201ENST00000363156 134 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 RNU6-198P-201ENST00000384258 104 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 RNU6-1197P-201ENST00000391183 107 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 FCF1P2-201ENST00000415284 583 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AL445646.1-201ENST00000431784 216 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AL031659.1-201ENST00000447075 539 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 NDUFA5P7-201ENST00000452914 242 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 PNPLA4P1-201ENST00000458328 305 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 RPL30P9-201ENST00000465586 330 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC022784.5-201ENST00000522241 437 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 NIFKP8-201ENST00000560500 874 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC010546.1-201ENST00000569391 485 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 ISCA1P3-201ENST00000577104 373 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC090616.3-201ENST00000582184 217 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AP001542.1-201ENST00000591314 200 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC092954.1-201ENST00000609121 445 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AL356585.4-201ENST00000623078 1229 ntBASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQB2P05538 AC008568.2-201ENST00000623862 2313 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 MTCO1P23-201ENST00000415223 1526 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC104454.1-201ENST00000421341 1401 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 GDI2P1-201ENST00000429312 1336 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 SNORD116-23-201ENST00000384645 92 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 SNORD65C-201ENST00000390962 71 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC009414.1-201ENST00000427200 443 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC092573.2-201ENST00000434546 243 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.03□□□□□ -2.08
HLA-DQB2P05538 RNF2P1-201ENST00000442955 1010 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 AC009296.1-201ENST00000443146 155 ntBASIC2.03□□□□□ -2.08
HLA-DQB2P05538 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms