Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 Y_RNA.465-201ENST00000384293 102 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 RNA5SP210-201ENST00000391034 120 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 RNA5SP252-201ENST00000391131 119 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 SAR1AP2-201ENST00000392696 594 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 RPS4XP3-201ENST00000398541 413 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 MIR1284-201ENST00000408337 120 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC096664.2-201ENST00000411843 406 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AL645937.1-202ENST00000421799 937 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AL953862.1-201ENST00000423016 168 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 OR4K11P-201ENST00000431829 904 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC090774.1-201ENST00000435925 246 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 NDUFB4P6-201ENST00000436819 366 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC025750.2-201ENST00000442609 450 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 EEF1E1P1-201ENST00000446998 430 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 ARPC3P5-201ENST00000448802 534 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 MTND1P31-201ENST00000449206 961 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 KC877373.1-201ENST00000479066 408 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC108729.1-201ENST00000487812 947 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 RPS27P27-201ENST00000498779 255 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 RNU6-714P-201ENST00000516963 103 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 CASP1P1-201ENST00000526345 212 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 OR6C7P-201ENST00000547875 934 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 MIR4635-201ENST00000583759 79 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AP001429.1-201ENST00000602568 530 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 BBIP1P1-201ENST00000602999 279 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AL133507.1-201ENST00000605269 557 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC006213.4-201ENST00000616184 634 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC109809.1-201ENST00000619665 545 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC090772.4-201ENST00000623599 362 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC090740.1-201ENST00000623193 2262 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 AC110774.1-201ENST00000623567 2018 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC005539.1-201ENST00000443768 1479 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AL390862.1-201ENST00000635467 1469 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 CUL1P1-201ENST00000509510 2425 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 VTRNA1-1-201ENST00000363120 99 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 RNU1-112P-201ENST00000364401 164 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 COTL1P1-201ENST00000422309 375 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC112220.1-201ENST00000434628 355 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 SDR42E1P3-201ENST00000438345 502 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 RPS24P13-201ENST00000442520 397 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC092155.2-201ENST00000454675 477 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 RPL21P8-201ENST00000465083 535 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 RPS3AP14-201ENST00000483907 780 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC022483.1-201ENST00000514020 567 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 SNORA31.1-201ENST00000515993 133 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 SNORA31.5-201ENST00000516190 133 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 RNA5SP367-201ENST00000516557 118 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 COX6CP8-201ENST00000522620 226 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC079600.2-201ENST00000550076 130 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC080013.3-201ENST00000606839 578 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC092953.2-201ENST00000608000 699 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AP002826.1-201ENST00000608835 315 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 DUXAP10-204ENST00000612052 616 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC002550.2-201ENST00000621246 394 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
HLA-DPB1P04440 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
HLA-DPB1P04440 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DPB1P04440 SNORA14A-201ENST00000364773 135 ntBASIC2.34□□□□□ -2.03
HLA-DPB1P04440 AL138827.1-201ENST00000402666 306 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms