Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 RNU1-109P-201ENST00000383960 147 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 MIR221-201ENST00000385135 110 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 RNU6-1300P-201ENST00000391046 108 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL121978.1-201ENST00000402778 359 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 RNA5SP38-201ENST00000410750 119 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC106883.1-201ENST00000418805 562 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 ATP5F1P1-201ENST00000433775 569 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 MTCYBP34-201ENST00000439552 670 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL645638.1-201ENST00000440519 361 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL031313.1-201ENST00000448435 256 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 HMGN3P1-201ENST00000453847 193 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC134050.1-201ENST00000495088 933 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 GTF2IP9-201ENST00000502460 301 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 GZMAP1-201ENST00000503054 631 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC107222.1-201ENST00000510899 637 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 MTCYBP20-201ENST00000524239 1129 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 LRRC6P1-201ENST00000532188 885 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL512310.1-201ENST00000548639 172 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC090695.1-201ENST00000561269 1222 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC093519.1-201ENST00000566109 298 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 RPL23AP92-201ENST00000603609 255 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC091946.2-201ENST00000606105 291 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AP000240.1-201ENST00000609910 452 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC023158.2-201ENST00000614876 543 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC009831.4-201ENST00000620744 325 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC109454.4-201ENST00000623411 649 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AL078595.3-201ENST00000623815 1166 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CTDNEP1O95476 LINC02211-204ENST00000642024 1070 ntBASIC2.59□□□□□ -1.99
CTDNEP1O95476 AC005336.3-201ENST00000623833 2679 ntBASIC2.59□□□□□ -2
CTDNEP1O95476 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.58□□□□□ -2
CTDNEP1O95476 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CTDNEP1O95476 AC138915.1-201ENST00000565427 1685 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 RNU6-989P-201ENST00000362756 107 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 SUGT1P1-201ENST00000379514 476 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 RPL17P50-201ENST00000396131 546 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AF274854.1-201ENST00000413236 615 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AL161449.1-201ENST00000414531 1199 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.58□□□□□ -2
CTDNEP1O95476 Z75741.2-201ENST00000417272 1167 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.58□□□□□ -2
CTDNEP1O95476 AC129850.1-201ENST00000436203 508 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AL591719.1-201ENST00000444669 744 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.58□□□□□ -2
CTDNEP1O95476 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CTDNEP1O95476 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.58□□□□□ -2
CTDNEP1O95476 AC009901.1-201ENST00000506703 541 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 RN7SKP31-201ENST00000516354 278 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.58□□□□□ -2
CTDNEP1O95476 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.58□□□□□ -2
CTDNEP1O95476 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.58□□□□□ -2
CTDNEP1O95476 LARP7P2-201ENST00000575306 125 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 MIR3912-201ENST00000577566 105 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.58□□□□□ -2
CTDNEP1O95476 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.58□□□□□ -2
CTDNEP1O95476 GAS5-AS1-201ENST00000602767 694 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC025588.3-201ENST00000604182 274 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC106791.2-201ENST00000604680 391 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC019159.1-201ENST00000605094 187 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC106052.1-201ENST00000608029 497 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC009974.1-201ENST00000608881 455 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC027449.1-201ENST00000608890 407 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC013562.2-201ENST00000611632 603 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC090116.1-201ENST00000615679 446 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC022960.3-201ENST00000619794 441 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC026634.1-201ENST00000634369 198 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 AC130650.2-201ENST00000618736 2403 ntBASIC2.58□□□□□ -2
CTDNEP1O95476 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CTDNEP1O95476 AC090740.1-201ENST00000623193 2262 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 RNU6-492P-201ENST00000363035 104 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 RNU6-1066P-201ENST00000363573 105 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.57□□□□□ -2
CTDNEP1O95476 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.57□□□□□ -2
CTDNEP1O95476 AL356320.2-201ENST00000417263 507 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.57□□□□□ -2
CTDNEP1O95476 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC241584.1-201ENST00000438469 1241 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC004022.1-201ENST00000447766 1066 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms