Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.35□□□□□ -2.19
SIX6O95475 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.35□□□□□ -2.19
SIX6O95475 AC013468.1-201ENST00000608680 598 ntBASIC1.35□□□□□ -2.19
SIX6O95475 AC025594.3-201ENST00000613068 790 ntBASIC1.35□□□□□ -2.19
SIX6O95475 AL590410.1-201ENST00000617925 333 ntBASIC1.35□□□□□ -2.19
SIX6O95475 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.35□□□□□ -2.19
SIX6O95475 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.35□□□□□ -2.19
SIX6O95475 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.35□□□□□ -2.19
SIX6O95475 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SIX6O95475 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SIX6O95475 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SIX6O95475 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.34□□□□□ -2.19
SIX6O95475 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC068050.1-201ENST00000394891 380 ntBASIC1.34□□□□□ -2.19
SIX6O95475 SSXP10-201ENST00000402595 565 ntBASIC1.34□□□□□ -2.19
SIX6O95475 RNU6-712P-201ENST00000410558 100 ntBASIC1.34□□□□□ -2.19
SIX6O95475 Z85995.1-201ENST00000415547 335 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.34□□□□□ -2.19
SIX6O95475 AL356320.1-201ENST00000429616 163 ntBASIC1.34□□□□□ -2.19
SIX6O95475 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.34□□□□□ -2.19
SIX6O95475 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.34□□□□□ -2.19
SIX6O95475 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.34□□□□□ -2.19
SIX6O95475 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SIX6O95475 snoU13.28-201ENST00000459235 104 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC023790.1-201ENST00000482174 347 ntBASIC1.34□□□□□ -2.19
SIX6O95475 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.34□□□□□ -2.19
SIX6O95475 RPL38P4-201ENST00000502376 214 ntBASIC1.34□□□□□ -2.19
SIX6O95475 MTCYBP17-201ENST00000503579 789 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.34□□□□□ -2.19
SIX6O95475 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.34□□□□□ -2.19
SIX6O95475 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.34□□□□□ -2.19
SIX6O95475 AP005435.4-201ENST00000529514 284 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC009097.3-201ENST00000563557 1018 ntBASIC1.34□□□□□ -2.19
SIX6O95475 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
SIX6O95475 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.34□□□□□ -2.19
SIX6O95475 HMGB1P51-201ENST00000605166 638 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC103710.4-201ENST00000609301 899 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AC004852.3-201ENST00000614131 326 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AP006248.3-201ENST00000623580 594 ntBASIC1.34□□□□□ -2.19
SIX6O95475 AL356118.1-201ENST00000635272 1078 ntBASIC1.34□□□□□ -2.19
SIX6O95475 HSPA8P4-201ENST00000511877 1920 ntBASIC1.34□□□□□ -2.2
SIX6O95475 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SIX6O95475 ZNF355P-201ENST00000427301 3216 ntBASIC1.34□□□□□ -2.2
SIX6O95475 AC016716.1-201ENST00000265882 708 ntBASIC1.33□□□□□ -2.2
SIX6O95475 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SIX6O95475 AL122016.1-201ENST00000403365 367 ntBASIC1.33□□□□□ -2.2
SIX6O95475 RPS3AP24-201ENST00000407896 734 ntBASIC1.33□□□□□ -2.2
SIX6O95475 RN7SKP101-201ENST00000411376 320 ntBASIC1.33□□□□□ -2.2
SIX6O95475 SEPT2P1-201ENST00000419651 180 ntBASIC1.33□□□□□ -2.2
SIX6O95475 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.33□□□□□ -2.2
SIX6O95475 AL356867.1-201ENST00000429623 299 ntBASIC1.33□□□□□ -2.2
SIX6O95475 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.33□□□□□ -2.2
SIX6O95475 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.33□□□□□ -2.2
SIX6O95475 AL672167.3-201ENST00000465951 960 ntBASIC1.33□□□□□ -2.2
SIX6O95475 AC107398.1-201ENST00000486904 505 ntBASIC1.33□□□□□ -2.2
SIX6O95475 AC021087.2-201ENST00000504656 1203 ntBASIC1.33□□□□□ -2.2
SIX6O95475 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.33□□□□□ -2.2
SIX6O95475 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.33□□□□□ -2.2
SIX6O95475 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.33□□□□□ -2.2
SIX6O95475 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.33□□□□□ -2.2
SIX6O95475 AL390838.2-201ENST00000602394 274 ntBASIC1.33□□□□□ -2.2
SIX6O95475 AL513477.2-201ENST00000607858 568 ntBASIC1.33□□□□□ -2.2
SIX6O95475 uc_338.5-201ENST00000611839 155 ntBASIC1.33□□□□□ -2.2
SIX6O95475 AP001002.2-201ENST00000625137 386 ntBASIC1.33□□□□□ -2.2
SIX6O95475 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.33□□□□□ -2.2
SIX6O95475 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SIX6O95475 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
SIX6O95475 ELF2P3-201ENST00000445099 1506 ntBASIC1.32□□□□□ -2.2
SIX6O95475 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.32□□□□□ -2.2
SIX6O95475 RNU6-525P-201ENST00000363685 104 ntBASIC1.32□□□□□ -2.2
SIX6O95475 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SIX6O95475 MIR23B-201ENST00000384832 97 ntBASIC1.32□□□□□ -2.2
SIX6O95475 MIR1303-201ENST00000408625 86 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AC096664.2-201ENST00000411843 406 ntBASIC1.32□□□□□ -2.2
SIX6O95475 TATDN1P1-201ENST00000414123 891 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.32□□□□□ -2.2
SIX6O95475 RPS26P30-201ENST00000443431 335 ntBASIC1.32□□□□□ -2.2
SIX6O95475 MTCYBP3-201ENST00000445588 1137 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.32□□□□□ -2.2
SIX6O95475 MTATP6P7-201ENST00000453315 681 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.32□□□□□ -2.2
SIX6O95475 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.32□□□□□ -2.2
SIX6O95475 OR52A4P-202ENST00000481634 799 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AC069528.1-202ENST00000482888 637 ntBASIC1.32□□□□□ -2.2
SIX6O95475 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.32□□□□□ -2.2
SIX6O95475 SNORD116-30-201ENST00000516468 85 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.32□□□□□ -2.2
SIX6O95475 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.32□□□□□ -2.2
SIX6O95475 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.32□□□□□ -2.2
SIX6O95475 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.32□□□□□ -2.2
SIX6O95475 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.32□□□□□ -2.2
SIX6O95475 AC126118.1-201ENST00000607744 628 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AC135803.1-201ENST00000608748 565 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AL161423.1-201ENST00000613700 262 ntBASIC1.32□□□□□ -2.2
SIX6O95475 MIR7515-201ENST00000637837 67 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AC130650.2-201ENST00000618736 2403 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AC011477.1-204ENST00000623416 1325 ntBASIC1.32□□□□□ -2.2
SIX6O95475 AL136360.1-201ENST00000503377 1900 ntBASIC1.31□□□□□ -2.2
SIX6O95475 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms