Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL391156.1-201ENST00000554965 554 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX4O60224 MIR3118-1-201ENST00000581787 76 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC005771.1-201ENST00000585581 349 ntBASIC3.29□□□□□ -1.88
SSX4O60224 HMGN1P30-201ENST00000589286 268 ntBASIC3.29□□□□□ -1.88
SSX4O60224 RSL24D1P11-201ENST00000591045 491 ntBASIC3.29□□□□□ -1.88
SSX4O60224 SRGNP1-201ENST00000603392 451 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC087752.4-201ENST00000605911 462 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC245008.1-201ENST00000608123 476 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC090970.3-201ENST00000612566 866 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AC091953.2-201ENST00000623979 160 ntBASIC3.29□□□□□ -1.88
SSX4O60224 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 MIR4275-201ENST00000636486 87 ntBASIC3.29□□□□□ -1.88
SSX4O60224 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX4O60224 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SSX4O60224 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX4O60224 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX4O60224 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX4O60224 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX4O60224 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.28□□□□□ -1.88
SSX4O60224 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSX4O60224 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.28□□□□□ -1.88
SSX4O60224 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 RNU1-39P-201ENST00000383897 165 ntBASIC3.28□□□□□ -1.88
SSX4O60224 SNORA36C-201ENST00000384289 132 ntBASIC3.28□□□□□ -1.88
SSX4O60224 RNU6-55P-201ENST00000411092 107 ntBASIC3.28□□□□□ -1.88
SSX4O60224 RNU6-954P-201ENST00000411355 107 ntBASIC3.28□□□□□ -1.88
SSX4O60224 RPS29P4-201ENST00000414733 161 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AC068533.1-201ENST00000418542 415 ntBASIC3.28□□□□□ -1.88
SSX4O60224 RPL21P32-201ENST00000419877 477 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AL035423.1-201ENST00000420331 213 ntBASIC3.28□□□□□ -1.88
SSX4O60224 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 AL591419.1-201ENST00000427423 339 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX4O60224 AC010153.1-201ENST00000432862 727 ntBASIC3.28□□□□□ -1.88
SSX4O60224 PGBD4P3-201ENST00000440731 581 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AL022238.1-201ENST00000442557 355 ntBASIC3.28□□□□□ -1.88
SSX4O60224 ELOCP30-201ENST00000447108 299 ntBASIC3.28□□□□□ -1.88
SSX4O60224 MTND1P29-201ENST00000448112 647 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AC006539.3-201ENST00000454258 129 ntBASIC3.28□□□□□ -1.88
SSX4O60224 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX4O60224 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.28□□□□□ -1.88
SSX4O60224 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX4O60224 DEFB108A-201ENST00000530110 222 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AP000873.5-201ENST00000533906 236 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 YPEL5P3-201ENST00000547227 352 ntBASIC3.28□□□□□ -1.88
SSX4O60224 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX4O60224 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX4O60224 ZNF415P1-201ENST00000582279 1166 ntBASIC3.28□□□□□ -1.88
SSX4O60224 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX4O60224 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.28□□□□□ -1.88
SSX4O60224 AC006116.10-201ENST00000591836 581 ntBASIC3.28□□□□□ -1.88
SSX4O60224 KC877982.1-201ENST00000602313 470 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 SEPT7P9-203ENST00000604116 343 ntBASIC3.28□□□□□ -1.88
SSX4O60224 RNU6-87P-201ENST00000607561 108 ntBASIC3.28□□□□□ -1.88
SSX4O60224 BX664608.1-201ENST00000610519 487 ntBASIC3.28□□□□□ -1.88
SSX4O60224 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 AL110115.1-201ENST00000614396 364 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 AC008250.2-201ENST00000615261 205 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AC108479.2-201ENST00000617314 601 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AC079684.1-201ENST00000621405 437 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AL357559.1-201ENST00000622228 274 ntBASIC3.28□□□□□ -1.88
SSX4O60224 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 AL136313.1-201ENST00000624804 202 ntBASIC3.28□□□□□ -1.88
SSX4O60224 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 AC090582.1-201ENST00000636321 199 ntBASIC3.28□□□□□ -1.88
SSX4O60224 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 AL161912.2-201ENST00000565707 3007 ntBASIC3.28□□□□□ -1.88
SSX4O60224 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX4O60224 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX4O60224 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SSX4O60224 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
SSX4O60224 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSX4O60224 RNY4P16-201ENST00000364768 94 ntBASIC3.27□□□□□ -1.89
SSX4O60224 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SSX4O60224 RNU6-297P-201ENST00000384636 107 ntBASIC3.27□□□□□ -1.89
SSX4O60224 MIR591-201ENST00000385290 95 ntBASIC3.27□□□□□ -1.89
SSX4O60224 RNU6-278P-201ENST00000390945 109 ntBASIC3.27□□□□□ -1.89
SSX4O60224 RPS3AP3-201ENST00000411933 242 ntBASIC3.27□□□□□ -1.89
SSX4O60224 SPA17P1-201ENST00000416656 452 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AC016907.1-201ENST00000419483 435 ntBASIC3.27□□□□□ -1.89
SSX4O60224 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
SSX4O60224 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms