Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 HMGN2P28-201ENST00000606102 262 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 MIR92B-201ENST00000607575 96 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 RNU6-156P-201ENST00000621869 107 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 AC009268.2-201ENST00000621925 457 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.75□□□□□ -1.81
SMAD6O43541 AC091905.1-201ENST00000624400 311 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.75□□□□□ -1.81
SMAD6O43541 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.75□□□□□ -1.81
SMAD6O43541 AC112487.2-201ENST00000637950 304 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMAD6O43541 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMAD6O43541 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMAD6O43541 AC138915.3-201ENST00000562908 1389 ntBASIC3.75□□□□□ -1.81
SMAD6O43541 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.74□□□□□ -1.81
SMAD6O43541 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMAD6O43541 AC091152.2-201ENST00000591628 2569 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMAD6O43541 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 RNU6-600P-201ENST00000362524 99 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 Y_RNA.279-201ENST00000364763 95 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 Y_RNA.356-201ENST00000365475 113 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMAD6O43541 RPL31P1-201ENST00000398116 372 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AP000567.1-201ENST00000406413 156 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.74□□□□□ -1.81
SMAD6O43541 RPL31P35-201ENST00000431058 377 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 SNRPEP7-201ENST00000438350 220 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.74□□□□□ -1.81
SMAD6O43541 RPL23AP16-201ENST00000441715 421 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AC093019.1-201ENST00000443135 252 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.74□□□□□ -1.81
SMAD6O43541 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC022364.2-201ENST00000457963 554 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMAD6O43541 RPL7L1P8-201ENST00000469911 741 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 HMGN1P10-201ENST00000474557 553 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 RPS4XP13-201ENST00000483219 789 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AC007182.2-201ENST00000489251 402 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 KLRA1P-201ENST00000503499 986 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.74□□□□□ -1.81
SMAD6O43541 BTF3L4P4-201ENST00000506381 449 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.74□□□□□ -1.81
SMAD6O43541 SCARNA15.1-201ENST00000516384 125 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 CENPUP1-201ENST00000526649 1202 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMAD6O43541 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.74□□□□□ -1.81
SMAD6O43541 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.74□□□□□ -1.81
SMAD6O43541 AL157394.1-201ENST00000562983 1224 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.74□□□□□ -1.81
SMAD6O43541 AL391646.1-201ENST00000603860 190 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 BRDTP1-201ENST00000605735 677 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AC011816.2-201ENST00000607089 556 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC009159.1-201ENST00000618386 642 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC112204.3-201ENST00000623822 332 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 AC011978.2-201ENST00000569835 2054 ntBASIC3.74□□□□□ -1.81
SMAD6O43541 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
SMAD6O43541 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMAD6O43541 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMAD6O43541 AC007823.1-201ENST00000569932 1566 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SMAD6O43541 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMAD6O43541 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.73□□□□□ -1.81
SMAD6O43541 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.73□□□□□ -1.81
SMAD6O43541 RNU4-73P-201ENST00000363164 141 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMAD6O43541 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SMAD6O43541 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMAD6O43541 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.73□□□□□ -1.81
SMAD6O43541 AL356057.2-201ENST00000403318 432 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 MIR1305-201ENST00000408300 86 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 RN7SKP266-201ENST00000410232 287 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.73□□□□□ -1.81
SMAD6O43541 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.73□□□□□ -1.81
SMAD6O43541 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.73□□□□□ -1.81
SMAD6O43541 AL589872.1-201ENST00000426602 288 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 ARF4P2-201ENST00000430209 526 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.73□□□□□ -1.81
SMAD6O43541 NDUFB1P1-201ENST00000435191 180 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 HMGB1P12-201ENST00000438594 598 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SMAD6O43541 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.73□□□□□ -1.81
SMAD6O43541 RPS20P24-201ENST00000457473 361 ntBASIC3.73□□□□□ -1.81
SMAD6O43541 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.73□□□□□ -1.81
SMAD6O43541 RNU7-136P-201ENST00000458819 69 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms