Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC007375.1-201ENST00000554513 578 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 BNIP3P26-201ENST00000600827 554 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL6A5A8TX70 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL6A5A8TX70 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 HMGB1P13-201ENST00000406019 642 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 RNA5SP338-201ENST00000410495 85 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 MIR1468-201ENST00000410600 86 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC109583.1-201ENST00000432156 268 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 MTCYBP12-201ENST00000440559 1134 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 HAUS1P1-201ENST00000505275 832 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 RNU6-405P-201ENST00000516637 110 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 RNU6-467P-201ENST00000517027 110 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AL132857.1-201ENST00000555180 708 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 CD24P2-201ENST00000565486 219 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 DUXAP3-201ENST00000603616 594 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AL160237.3-201ENST00000604114 1013 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC112191.3-201ENST00000604371 277 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 BNIP3P4-201ENST00000604946 565 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AL512283.1-201ENST00000606756 1384 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AF274854.1-201ENST00000413236 615 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 ARL5AP3-201ENST00000439327 386 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 RNU6-1132P-201ENST00000459214 107 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 snoU13.3-201ENST00000459441 104 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC023813.2-201ENST00000564321 469 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC010735.1-201ENST00000567305 1026 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 AC060766.3-201ENST00000591442 263 ntBASIC1.19□□□□□ -2.22
COL6A5A8TX70 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 RNA5SP138-201ENST00000365098 114 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 Y_RNA.457-201ENST00000384237 111 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 MIR591-201ENST00000385290 95 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 RNU6-603P-201ENST00000411403 107 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC090515.1-201ENST00000465295 476 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC069528.1-202ENST00000482888 637 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC105313.1-201ENST00000509121 353 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 HMGB1P47-201ENST00000511281 589 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC007229.1-201ENST00000590455 412 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 RPL23AP88-201ENST00000605759 454 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC098679.5-201ENST00000624394 571 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 MIR4278-201ENST00000636094 69 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
COL6A5A8TX70 UBE2L2-201ENST00000254302 429 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 SNORA9.1-201ENST00000362412 131 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AIMP1P2-201ENST00000425294 312 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 UBE2V2P1-201ENST00000434717 398 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC092451.1-201ENST00000480211 153 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC023424.2-201ENST00000493479 777 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL6A5A8TX70 RNU11-2P-201ENST00000516898 142 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.18□□□□□ -2.22
COL6A5A8TX70 AL121594.5-201ENST00000631724 573 ntBASIC1.18□□□□□ -2.22
COL6A5A8TX70 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A5A8TX70 AC121333.1-201ENST00000567488 2709 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 Y_RNA.412-201ENST00000384001 104 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 DPPA2P1-201ENST00000428060 556 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 OR7L1P-201ENST00000456181 380 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 ZNF192P1-203ENST00000565888 810 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A5A8TX70 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A5A8TX70 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A5A8TX70 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL6A5A8TX70 RNA5SP27-201ENST00000363839 119 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 MTND4P13-201ENST00000402078 1023 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 AL030996.1-201ENST00000411430 235 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 AL512504.1-201ENST00000415494 778 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 FNDC3CP-201ENST00000420795 1155 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 AC087190.1-201ENST00000484462 480 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 TBCAP3-201ENST00000512475 312 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A5A8TX70 MIR4419B-201ENST00000577260 68 ntBASIC1.17□□□□□ -2.22
COL6A5A8TX70 AL109653.1-201ENST00000603091 248 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms