Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL627230.6-201ENST00000611129 280 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AL161423.1-201ENST00000613700 262 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AP005212.4-201ENST00000614206 710 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 AC087359.1-201ENST00000508335 1740 ntBASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TCRBV3S1A0A5B6 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 RNU6-198P-201ENST00000384258 104 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 RNU6-339P-201ENST00000384310 107 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 U3.29-201ENST00000391296 212 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 RNA5SP425-201ENST00000410336 112 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AC010385.1-201ENST00000412374 256 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 RPL7P54-201ENST00000438336 674 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 PMCHL2-203ENST00000457791 237 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AC104685.1-201ENST00000502445 371 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 RNF138P1-201ENST00000502765 546 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AC079395.3-201ENST00000615161 484 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AL356118.1-201ENST00000635272 1078 ntBASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.5□□□□□ -2.17
TCRBV3S1A0A5B6 AL513185.3-201ENST00000433335 1300 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC011477.1-204ENST00000623416 1325 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 MCTS2P-201ENST00000394552 546 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 RPL7L1P10-201ENST00000427790 463 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AL139415.2-201ENST00000431968 163 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 ARPC3P1-201ENST00000437218 533 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AL360221.1-201ENST00000445989 335 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 CBX3P3-201ENST00000508108 532 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 MRPS17P9-201ENST00000511924 393 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 MRPS36P2-201ENST00000512569 299 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AP004607.1-201ENST00000524456 203 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 EIF4EP5-201ENST00000528228 640 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC022662.1-201ENST00000580252 331 ntBASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TCRBV3S1A0A5B6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 MTND5P29-201ENST00000458676 1807 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 U8.3-201ENST00000363321 132 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 MIR767-201ENST00000390228 109 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 DSTNP4-201ENST00000399472 474 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC074117.2-201ENST00000417130 397 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 FAM103A2P-201ENST00000444122 354 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AL353705.4-201ENST00000449661 238 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 MTATP6P7-201ENST00000453315 681 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 USP9YP10-201ENST00000454868 628 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 C1DP3-201ENST00000455013 423 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC069528.1-202ENST00000482888 637 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AL450336.1-201ENST00000605180 586 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC109809.1-201ENST00000619665 545 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 ZNF876P-202ENST00000398732 1485 ntBASIC1.48□□□□□ -2.17
TCRBV3S1A0A5B6 AC130650.2-201ENST00000618736 2403 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC016716.1-201ENST00000265882 708 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 RNA5SP387-201ENST00000364226 106 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 Y_RNA.333-201ENST00000365274 102 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AL445183.3-201ENST00000414168 502 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 SEPT2P1-201ENST00000419651 180 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 BX510359.4-201ENST00000423750 193 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AL358075.3-201ENST00000426289 226 ntBASIC1.47□□□□□ -2.17
TCRBV3S1A0A5B6 AL356867.1-201ENST00000429623 299 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms