Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC068137.3-201ENST00000639191 341 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC099654.12-201ENST00000639868 649 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC073869.6-201ENST00000640656 341 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.59□□□□□ -1.84
SIX4Q9UIU6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.59□□□□□ -1.84
SIX4Q9UIU6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SIX4Q9UIU6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 MTND5P26-201ENST00000426018 1752 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 SNORD46.1-201ENST00000364139 104 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 Y_RNA.548-201ENST00000384656 105 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 Y_RNA.582-201ENST00000391023 95 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL356421.1-201ENST00000403255 413 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 RPL7P25-201ENST00000404151 721 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 RNU2-15P-201ENST00000410692 191 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 HMGN1P24-201ENST00000412282 298 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL356968.1-201ENST00000416622 474 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL158156.1-201ENST00000422509 473 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 RPL23AP82-202ENST00000427528 469 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 OR2B8P-201ENST00000432841 938 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL138799.3-201ENST00000438968 350 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 MTND6P13-201ENST00000443510 523 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 RPL29P29-201ENST00000448725 423 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 RPL7P52-201ENST00000449200 742 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL358832.1-201ENST00000497800 389 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AP003467.2-201ENST00000520175 319 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AP004242.1-201ENST00000533701 349 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 MIR3944-201ENST00000581277 108 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 HMGN1P30-201ENST00000589286 268 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC090578.1-201ENST00000604955 591 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC007179.3-201ENST00000604976 235 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC109347.2-201ENST00000610220 349 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AL596245.1-201ENST00000618994 362 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC005832.2-201ENST00000538921 1430 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 AC058791.1-201ENST00000608412 3198 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SIX4Q9UIU6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.58□□□□□ -1.84
SIX4Q9UIU6 Z83843.1-201ENST00000604070 3685 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 Y_RNA.6-201ENST00000362350 114 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 SNORD115.1-201ENST00000391109 76 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 RNU2-37P-201ENST00000410695 177 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 AC063979.1-201ENST00000415539 377 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 RPL22P17-201ENST00000438729 315 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 DNAJC19P4-201ENST00000440115 345 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 Z75741.1-201ENST00000446793 314 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 RPS20P32-201ENST00000456044 356 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 AC093899.1-201ENST00000457984 376 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 snoU13.22-201ENST00000459428 104 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 PTGES3P3-201ENST00000511479 482 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 RNU6-27P-201ENST00000516146 107 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 RNU6-430P-201ENST00000517078 107 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
SIX4Q9UIU6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIX4Q9UIU6 OR8L1P-201ENST00000534005 955 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms