Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC006366.1-201ENST00000422002 759 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 TAAR7P-201ENST00000436141 242 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC093156.1-201ENST00000440382 670 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC244505.5-201ENST00000443639 207 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC087369.1-201ENST00000520775 996 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AP003730.1-201ENST00000524605 285 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AP002963.1-201ENST00000530590 184 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC093012.1-202ENST00000549403 582 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC124947.2-202ENST00000552735 133 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 MIR4425-201ENST00000580572 84 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC068790.4-201ENST00000602474 263 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 RMST_8.1-201ENST00000610287 165 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC110801.1-201ENST00000623590 212 ntBASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP1AQ9HD42 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 OR5J1P-201ENST00000313544 939 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 RNA5SP130-201ENST00000364431 114 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 RNU6-1197P-201ENST00000391183 107 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 DEFB108C-201ENST00000400154 252 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 RNU2-36P-201ENST00000410361 191 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 SNORA57.3-201ENST00000411095 141 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 CDK8P2-201ENST00000415020 547 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 RPL26P29-201ENST00000415623 438 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC245054.1-201ENST00000420944 258 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 VN1R108P-201ENST00000431580 830 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC092573.2-201ENST00000434546 243 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC104850.1-201ENST00000435940 476 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC020550.1-201ENST00000447385 163 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 RPS27AP1-201ENST00000475545 471 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 VN1R105P-201ENST00000486595 910 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 SNORA18.6-201ENST00000516792 115 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 MRPL49P2-201ENST00000521066 465 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 TRAV37-201ENST00000553906 342 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC037471.2-201ENST00000564941 598 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 RPL23AP84-201ENST00000571193 464 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AC137800.2-201ENST00000574375 120 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 MIR4528-201ENST00000577763 90 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 DUXAP4-201ENST00000603046 613 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 SNORA51-201ENST00000606420 132 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 AL732618.1-201ENST00000623251 301 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 PISRT1-201ENST00000626175 531 ntBASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP1AQ9HD42 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CHMP1AQ9HD42 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 Z85995.1-201ENST00000415547 335 ntBASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 AL356867.1-201ENST00000429623 299 ntBASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 FCF1P1-201ENST00000432690 571 ntBASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 TBCAP1-201ENST00000436520 327 ntBASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 USP9YP15-201ENST00000442391 422 ntBASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 AC009237.8-201ENST00000445492 379 ntBASIC3.21□□□□□ -1.9
CHMP1AQ9HD42 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms