Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 RN7SKP44-201ENST00000363602 316 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.409-201ENST00000383990 98 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 RNU6-213P-201ENST00000384051 104 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 RPL7P60-201ENST00000397636 735 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 HLFP1-201ENST00000402375 499 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AL590704.1-201ENST00000402856 794 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 RNU2-47P-201ENST00000410649 186 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 USP9YP6-201ENST00000413550 854 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC092447.6-201ENST00000414578 210 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AL353193.1-201ENST00000421444 268 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC007283.2-201ENST00000424739 197 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 MRPS18BP2-201ENST00000434310 759 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 TIMM9P1-201ENST00000436122 256 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC027673.1-201ENST00000456245 405 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 RN7SL93P-201ENST00000463035 293 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 MTCO2P29-201ENST00000465212 189 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC084198.1-201ENST00000477747 402 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC092989.1-201ENST00000481235 277 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 RNA5SP337-201ENST00000517007 109 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 RNU6-1220P-201ENST00000517126 108 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC022616.3-201ENST00000523940 148 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 CYCSP30-201ENST00000546447 172 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC006504.3-201ENST00000586818 523 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 CR392039.5-201ENST00000623201 510 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 AC112204.3-201ENST00000623822 332 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.97□□□□□ -1.77
USP29Q9HBJ7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
USP29Q9HBJ7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 RNU6-263P-201ENST00000363811 107 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 RNU6-1090P-201ENST00000364065 94 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 DPPA2P1-201ENST00000428060 556 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 RAC1P7-201ENST00000445367 377 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 WASF1P1-201ENST00000447560 1131 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 MTND1P9-201ENST00000453775 944 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 snoU13.22-201ENST00000459428 104 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 TRBV12-2-201ENST00000489763 344 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC021146.1-201ENST00000511202 716 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 RNU6-528P-201ENST00000516926 100 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 NRON-201ENST00000517270 370 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AP003034.1-201ENST00000534621 422 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AL157687.1-201ENST00000554853 619 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC068135.2-201ENST00000569293 1028 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 MTCO3P24-201ENST00000572729 782 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC090616.5-202ENST00000582111 297 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 KC877982.1-201ENST00000602313 470 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC008277.2-201ENST00000605196 797 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC104458.1-201ENST00000608243 463 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 uc_338.12-201ENST00000616344 181 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC039056.2-201ENST00000622261 511 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AC112200.1-201ENST00000625015 234 ntBASIC3.96□□□□□ -1.78
USP29Q9HBJ7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.96□□□□□ -1.78
USP29Q9HBJ7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms