Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC006484.1-201ENST00000435086 1884 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL353746.1-201ENST00000566293 6881 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL391987.6-201ENST00000305671 199 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-37P-201ENST00000362692 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.48-201ENST00000362710 103 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.105-201ENST00000363182 111 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RN7SKP145-201ENST00000363291 303 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU1-49P-201ENST00000363468 159 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 U3.6-201ENST00000363622 211 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNY3P11-201ENST00000364153 102 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-11P-201ENST00000364234 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 SNORA7.2-201ENST00000364446 145 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU105B-201ENST00000364478 208 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP140-201ENST00000364524 92 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-7-201ENST00000364784 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU4-9P-201ENST00000364951 139 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-8-201ENST00000365467 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 CRP-203ENST00000368111 512 ntTSL 3 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 CRP-204ENST00000368112 787 ntTSL 2 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-25P-201ENST00000383873 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-1-201ENST00000383898 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 U3.52-201ENST00000384034 216 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.439-201ENST00000384119 94 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-48P-201ENST00000384161 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-36P-201ENST00000384172 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-4P-201ENST00000384205 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-5P-201ENST00000384238 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.464-201ENST00000384282 110 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-3P-201ENST00000384314 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-16P-201ENST00000384385 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-15P-201ENST00000384534 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-2-201ENST00000384627 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-29P-201ENST00000384637 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU6-9-201ENST00000384776 107 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 MIR128-2-201ENST00000384893 84 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 MIR10A-201ENST00000385043 110 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 SNORD78.2-201ENST00000391076 69 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPL21P75-201ENST00000396599 483 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPL21P28-201ENST00000401418 483 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 MIR548M-201ENST00000408260 86 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP36-201ENST00000410197 133 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP494-201ENST00000410653 129 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC109638.1-201ENST00000417406 326 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPL21P38-201ENST00000418090 167 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL590556.1-201ENST00000423231 483 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AHCYP8-201ENST00000425108 209 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 PIGPP3-201ENST00000425307 415 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC009362.1-201ENST00000427253 406 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL445305.1-201ENST00000432577 575 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPE-210ENST00000438204 796 ntTSL 2 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 Z82210.1-201ENST00000440037 231 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL663074.2-201ENST00000440621 479 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC124916.1-201ENST00000444020 547 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC092421.1-201ENST00000448148 418 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 snoU13.24-201ENST00000458998 104 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 SNORD108-201ENST00000459332 71 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RNU7-169P-201ENST00000459456 61 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPL21P11-201ENST00000461458 483 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPL21P39-201ENST00000463605 483 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC087190.1-201ENST00000484462 480 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RN7SL868P-201ENST00000485915 303 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC107032.1-201ENST00000485945 480 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC132942.1-201ENST00000486753 483 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RN7SL184P-201ENST00000488308 297 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AL049874.1-201ENST00000489560 388 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 COX6B1P2-201ENST00000489624 230 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPL34P29-201ENST00000491411 325 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC093591.1-201ENST00000491435 481 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 RPL21P16-201ENST00000495531 483 ntBASIC1.57□□□□□ -2.16
LCE3DQ9BYE3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms