Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AL590664.1-201ENST00000448065 339 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AC104164.3-201ENST00000467363 1258 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 SNORA31.11-201ENST00000516528 139 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 SNORA70.24-201ENST00000517233 118 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 TPMTP1-201ENST00000592307 737 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AC005014.3-201ENST00000605985 190 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AP000254.1-201ENST00000609934 520 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC50Q8IVM0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AL365361.1-201ENST00000566942 3481 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 GNG5P1-201ENST00000255500 204 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 SNORD56.5-201ENST00000364281 72 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 Y_RNA.333-201ENST00000365274 102 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 RNA5SP210-201ENST00000391034 120 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AL138827.1-201ENST00000402666 306 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 FO393413.1-201ENST00000402892 195 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 HMGB1P17-201ENST00000403495 628 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AL645937.1-202ENST00000421799 937 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 BX119904.4-201ENST00000424402 301 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC087499.2-201ENST00000432861 149 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC112220.1-201ENST00000434628 355 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AL592447.1-201ENST00000447592 540 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 NANOGNBP1-201ENST00000448444 480 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 SNRPGP6-201ENST00000451124 220 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 MTND3P3-201ENST00000505004 126 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 VN1R104P-201ENST00000505115 1009 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC026427.2-201ENST00000506228 536 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 SNORA31.22-201ENST00000517204 135 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC007954.1-201ENST00000554198 494 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC105224.1-201ENST00000587055 421 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AL133507.1-201ENST00000605269 557 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 DUXAP10-204ENST00000612052 616 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 AC231657.1-201ENST00000624313 397 ntBASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC50Q8IVM0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 NACA3P-201ENST00000359690 648 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 SNORD116.1-201ENST00000365628 92 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 SNORA44-201ENST00000384584 132 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 RPL23AP29-201ENST00000397284 453 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 RNU4-22P-201ENST00000411058 166 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 BX682237.1-201ENST00000415016 335 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 MTCO2P5-201ENST00000422621 426 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 OR4K11P-201ENST00000431829 904 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AL358794.1-201ENST00000445689 381 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 RPL31P50-201ENST00000471002 296 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 SRIP1-201ENST00000489235 288 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AC147055.4-201ENST00000504399 745 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 HIGD1AP13-201ENST00000509878 289 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AC006445.2-201ENST00000510061 472 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 RNU6-798P-201ENST00000516912 103 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AC100870.1-201ENST00000522035 505 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AC021451.1-201ENST00000523498 1129 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 OR7K1P-201ENST00000546439 926 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 NBEAP1-201ENST00000554452 979 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AP001429.1-201ENST00000602568 530 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 NUTF2P8-201ENST00000604593 363 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AC131235.4-201ENST00000609288 620 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AL137790.1-201ENST00000634283 177 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC50Q8IVM0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms