Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RNU6-114P-201ENST00000384704 105 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 RNA5SP424-201ENST00000390988 115 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MIR1277-201ENST00000408536 78 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 SNORA3.3-201ENST00000408712 125 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC006548.1-201ENST00000427470 102 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MTCO2P11-201ENST00000431069 680 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MTND3P23-201ENST00000431980 347 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC000111.3-201ENST00000433478 193 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC098614.3-201ENST00000438957 440 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AL590399.6-201ENST00000446396 307 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC132479.1-201ENST00000449160 144 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC006480.1-201ENST00000449887 378 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MTND2P24-201ENST00000453434 806 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 RPL23AP62-201ENST00000463396 453 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 RPL31P58-201ENST00000469001 379 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 SNRPGP3-201ENST00000469405 227 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC019235.1-201ENST00000503847 207 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC074344.1-201ENST00000512823 224 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MIR2114-201ENST00000516645 80 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 RNU6-445P-201ENST00000516949 107 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MIR2116-201ENST00000517221 80 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MIR3146-201ENST00000580367 79 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC103710.3-201ENST00000608157 948 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 U73479.1-201ENST00000618062 168 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AC048347.1-201ENST00000624621 427 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 CR381572.1-201ENST00000625098 102 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 AL159972.1-201ENST00000625150 448 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MIR3688-2-201ENST00000636963 87 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 MTND4P23-201ENST00000447723 1363 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 SNORA70.2-201ENST00000364506 135 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.813-201ENST00000364639 102 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 RNY4P16-201ENST00000364768 94 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 SNORA20.2-201ENST00000383922 131 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MIR30B-201ENST00000384850 88 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 HSPE1P26-201ENST00000405341 275 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 HMGB3P20-201ENST00000417997 600 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MTCYBP24-201ENST00000420387 1106 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AMD1P1-201ENST00000457220 922 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MTCO2P29-201ENST00000465212 189 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC023194.1-201ENST00000493084 308 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 TMEM248P1-201ENST00000510579 951 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC114781.4-201ENST00000513707 639 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 SCARNA14-201ENST00000516903 136 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 OR5AQ1P-201ENST00000527596 927 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 HIGD1AP5-201ENST00000529959 259 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC008011.1-201ENST00000545989 227 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 PARP1P2-201ENST00000556806 195 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 HMGB1P33-201ENST00000563485 527 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC006504.3-201ENST00000586818 523 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC112230.1-201ENST00000604342 547 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AP001330.5-201ENST00000607176 411 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AC112204.3-201ENST00000623822 332 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 RNA5SP196-201ENST00000625967 102 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 MAPK10-372ENST00000641954 3413 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 AL133383.2-201ENST00000622958 2336 ntBASIC3.87□□□□□ -1.79
RFX6Q8HWS3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX6Q8HWS3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms